Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P11
(945 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 24 2.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 4.0
AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 23 5.3
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 7.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.0
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.8 bits (49), Expect = 2.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 164 THGFPNQNQTRHCYQSYVDF 223
THGFPN Q + +Q +D+
Sbjct: 230 THGFPNDAQP-YIFQEVIDY 248
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.0 bits (47), Expect = 4.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 162 RPTXSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGL 293
+ T L K+ K T T +ARK KNT SR + L
Sbjct: 322 KKTVPLKKVNSKYILKSTLTPKLARKQFQKNTTGLERSRSWSSL 365
>AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein.
Length = 80
Score = 22.6 bits (46), Expect = 5.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 106 ISNMPEMIKSPADLKTAPF 162
+S MP+ +K P D AP+
Sbjct: 9 VSTMPKSLKEPCDGCAAPY 27
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 7.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 278 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 361
R++ NE VDK N+RA G +I
Sbjct: 376 RIFSPHEENESVDKHPNRRARGQLRTKI 403
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 38 WLKLEWVDYNLQWNESEYGGVKD 60
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 38 WLKLEWVDYNLQWNESEYGGVKD 60
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 38 WLKLEWVDYNLQWNESEYGGVKD 60
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 38 WLKLEWVDYNLQWNESEYGGVKD 60
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 38 WLKLEWVDYNLQWNESEYGGVKD 60
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 38 WLKLEWVDYNLQWNESEYGGVKD 60
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 106 WLKLEWVDYNLQWNESEYGGVKD 128
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 102 YLAVSWIYFNRKWQPTTIXNLKD 34
+L + W+ +N +W + +KD
Sbjct: 106 WLKLEWVDYNLQWNESEYGGVKD 128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,263
Number of Sequences: 438
Number of extensions: 2629
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -