Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P07
         (875 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17BA2 Cluster: Putative uncharacterized protein; n=1; ...    38   0.44 
UniRef50_Q16YL9 Cluster: Zinc finger protein; n=1; Aedes aegypti...    37   0.58 
UniRef50_Q17BB2 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q4V6Y7 Cluster: IP01295p; n=3; Sophophora|Rep: IP01295p...    35   2.4  
UniRef50_UPI0000D56201 Cluster: PREDICTED: similar to CG2202-PA;...    35   3.1  
UniRef50_P17492 Cluster: Replication protein; n=6; Proteobacteri...    35   3.1  
UniRef50_A5DJJ9 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  
UniRef50_UPI0000DB729E Cluster: PREDICTED: similar to myotubular...    33   9.5  
UniRef50_Q16IT9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q17BA2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 731

 Score = 37.5 bits (83), Expect = 0.44
 Identities = 26/89 (29%), Positives = 41/89 (46%)
 Frame = +2

Query: 227 DPGPRXCRCCLAEGCYKDISTEYFWMGKREVYAEMLAETFSVSIAYSKSSGPNSNSRLIC 406
           D G   CR CLA    + IS       + ++  +ML+E    + ++  S  P      +C
Sbjct: 11  DDGVLRCRTCLAAEVDELISLHCRCESQDKLVMDMLSEVAPQTRSHRNSELPQH----VC 66

Query: 407 EPCISRLRDASDFKKQVQECEKTFMQYLD 493
           + C+ +L +A  F+KQVQ     F Q  D
Sbjct: 67  DHCLVQLDEAFTFRKQVQNALLGFRQAQD 95


>UniRef50_Q16YL9 Cluster: Zinc finger protein; n=1; Aedes
           aegypti|Rep: Zinc finger protein - Aedes aegypti
           (Yellowfever mosquito)
          Length = 380

 Score = 37.1 bits (82), Expect = 0.58
 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
 Frame = +2

Query: 239 RXCRCCLAEGCYKDI-STEYFWMGKREVYAEMLAETFSVSIAYSKSSGPNSNSRLICEPC 415
           R CR CL EG +  I +T+   M      A+ML    ++ +  SK+ G  +    IC  C
Sbjct: 7   RLCRVCLEEGVFTSIFNTDLVAMAP----ADMLVMCANIKV--SKNDGLPTT---ICNNC 57

Query: 416 ISRLRDASDFKKQVQECEKTFMQY--LDPGSSSTTLESEVQTSS----TDKRVKVEQVKI 577
           + RL  A   K+Q +  +    QY  L  G  S +++ E  T      T K+  V + K+
Sbjct: 58  MYRLGVAFHLKQQCENSDMRLRQYIGLMTGVYSNSMDKETMTDDSWMVTSKKSDVGERKV 117

Query: 578 ERQ 586
            ++
Sbjct: 118 TKK 120


>UniRef50_Q17BB2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 583

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
 Frame = +2

Query: 245 CRCCLAEGCYKDISTEYFWMGKREVYAEMLAETFSVSIAYSKSSGPNSNSRLICEPCISR 424
           CR C     ++ +    +    +E+ ++M      + ++YS     +   + ICE C++R
Sbjct: 5   CRICRKTAAFEPVWLNSWSESLKELISDMYTYCTQLEVSYS-----DLLPQQICEDCLNR 59

Query: 425 LRDASDFKKQVQECEKTFMQYLDPGSSST----TLESEVQTSSTDKRVKVEQ 568
           L  A DF+K  +  +  F + L     ST     +E+E    + D  +K+ +
Sbjct: 60  LTMAYDFRKLCRHSDALFREQLRRQKRSTITPVVVEAEGSEINMDWTIKIPE 111


>UniRef50_Q4V6Y7 Cluster: IP01295p; n=3; Sophophora|Rep: IP01295p -
           Drosophila melanogaster (Fruit fly)
          Length = 418

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = +2

Query: 236 PRXCRCCLAEGCYKDISTEYFWMGKREVYAEMLAETFSVSIAYSKSSGPNSNSRLICEPC 415
           P  CRCCL E           +    +  +++  E  +++ A     G N    +IC+ C
Sbjct: 9   PLVCRCCLLE-------QPPLYHSLYDASSQLAVELKALAPALRLEHGDNLTD-VICDLC 60

Query: 416 ISRLRDASDFKKQVQECEK 472
           + RL DA DF+++ +  E+
Sbjct: 61  LRRLHDARDFQRRCEHSEQ 79


>UniRef50_UPI0000D56201 Cluster: PREDICTED: similar to CG2202-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG2202-PA - Tribolium castaneum
          Length = 822

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 395 RLICEPCISRLRDASDFKKQVQECEKTFMQYLDPGSSSTTLESEVQTS 538
           +LIC  C  +L+ A  FK+Q QE + +  +Y+    S   +++EV+ +
Sbjct: 58  KLICATCTEQLKGAYIFKQQCQETDVSLREYVKNFKSDDDVKTEVEAT 105


>UniRef50_P17492 Cluster: Replication protein; n=6;
           Proteobacteria|Rep: Replication protein - Neisseria
           gonorrhoeae
          Length = 328

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +2

Query: 278 DISTEYFWMGKREVYAEMLAETFSVSIAYSKSSGPNSNSRLICEPCISRLRDASDFKKQV 457
           ++ T+Y  +G RE+  E L E   V   Y +    NS ++ + EP I+ + + SD   +V
Sbjct: 145 ELITQYRSVGSREITVEKLKEWLQVENKYPRF---NSLNQRVLEPAITEINEKSDLVVEV 201

Query: 458 QECEK 472
           ++ ++
Sbjct: 202 EQIKR 206


>UniRef50_A5DJJ9 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 390

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -1

Query: 314 PSFPSKNIQWKCLCNSPQRDNTDKXVGPGRHSLVLSAIITKLSLNLH 174
           PS+P K+ Q   L N PQR+ +D      R ++ +S+ + K S+NL+
Sbjct: 221 PSYPMKDYQLD-LTNVPQRETSDTSSSRNRTNVQISSTVPKSSINLN 266


>UniRef50_UPI0000DB729E Cluster: PREDICTED: similar to
            myotubularin-related protein 3 isoform c; n=2;
            Apocrita|Rep: PREDICTED: similar to myotubularin-related
            protein 3 isoform c - Apis mellifera
          Length = 1013

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
 Frame = +2

Query: 296  FWMGKREVYAEMLAETFSVSIAYSKSSGPNS---NSRLICEPCISRLRDASDFKKQVQEC 466
            FW+G+R+ +     + F    + + +  PN    N   +C  C SRL       +    C
Sbjct: 899  FWLGRRKHHCRCCGKIFCADCSENSTPLPNEQLYNPVRVCSDCFSRLH------RHTSPC 952

Query: 467  EKTFMQYLDPGSSSTTLESEVQTSSTDKRVK 559
            +   +++   G + T L S  +  ST +R K
Sbjct: 953  QYN-IRHQSKGENDTELSSNSENLSTCQRSK 982


>UniRef50_Q16IT9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 466

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = +2

Query: 401 ICEPCISRLRDASDFKKQVQECEKTFMQYLDPGSSSTTLESEVQTSSTDKRVKVEQVKIE 580
           +C+ C S + +  DF ++VQ+  +++++ L         + +  T+ST K   +E VK+E
Sbjct: 8   VCQQCCSIIGEFYDFSEKVQQ-NQSYLRMLAGECQEVKHDPDQWTASTSKSEIIEMVKVE 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,628,780
Number of Sequences: 1657284
Number of extensions: 11974266
Number of successful extensions: 30223
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30207
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)