Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P05
         (981 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    31   1.1  
07_01_0463 + 3502708-3503535                                           31   1.4  

>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +2

Query: 716 KXKXKEXKKKKKXKXGXXXGKXXXKXXXGXKKXRKKKK 829
           K K K+ KKKKK K      K   K     KK +KKKK
Sbjct: 70  KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107



 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +2

Query: 716 KXKXKEXKKKKKXKXGXXXGKXXXKXXXGXKKXRKKKK 829
           K K K+ KKKKK K      K   K     KK +KKKK
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKK 105



 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 715 KXKXKRXKKKKKXXXXXXXXKKXXXKXXXXKKXXKKKK 828
           K K K+ KKKKK        KK   K    KK  KKK+
Sbjct: 71  KKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108



 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +1

Query: 715 KXKXKRXKKKKKXXXXXXXXKKXXXKXXXXKKXXKKKK 828
           K K K+ KKKKK         K   K    KK  KKKK
Sbjct: 69  KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106



 Score = 28.3 bits (60), Expect = 9.9
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = +1

Query: 805 KKXXKKKKXXXXXXGXKXKXKXXXXXKXXXKKXKKKKXXXR 927
           KK  KKKK        K K K     K   KK KKKK   R
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108


>07_01_0463 + 3502708-3503535
          Length = 275

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 1/89 (1%)
 Frame = +1

Query: 715 KXKXKRXKKKKKXXXXXXXXKKXXXKXXXXKKXXKKK-KXXXXXXGXKXKXKXXXXXKXX 891
           K K  + KKK K        KK        KK  KKK K      G K K K     +  
Sbjct: 105 KEKEMKEKKKDKSDKKEEGKKKKDGDEEEGKKKEKKKDKDGDEKEGKKEKKKDKDGDEEE 164

Query: 892 XKKXKKKKXXXRXXKXXXXKKXXXKRKXE 978
             K K+KK   +  K         K K E
Sbjct: 165 EGKKKEKKKKDKGDKEKTNDPAKLKAKLE 193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.304    0.126    0.318 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,862,098
Number of Sequences: 37544
Number of extensions: 12314
Number of successful extensions: 148
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)