Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P04
         (906 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.7  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 700 RSHLLKDFPPVAVREIVDCLRQITVAVKQILELVFD 593
           +S+ +++  P   R +VD  R  T+ VKQ  + V D
Sbjct: 18  KSYSIENGYPARRRSLVDDARFETLVVKQTKQSVLD 53


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 192  EDFRQAVSFGRHGVINFAKSVASDA 118
            +DF+     GRH ++   ++V +DA
Sbjct: 1743 DDFKNRCGEGRHPLLTTIRNVLADA 1767


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = -3

Query: 727 LETIALTHGRSHLLKDFPPVAVREIVDCLRQITVA 623
           L T+ LTH  S  +++FP  A++ I++ L ++ ++
Sbjct: 17  LLTLKLTHALSSSVQNFPSDAIK-ILNRLEELDLS 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,998
Number of Sequences: 336
Number of extensions: 3909
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)