Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P04
         (906 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537519-1|CAD97771.1|  166|Homo sapiens hypothetical protein pr...    33   1.1  
U36601-1|AAC27120.1|  883|Homo sapiens heparan N-deacetylase/N-s...    31   7.6  
BC110589-1|AAI10590.1|  883|Homo sapiens N-deacetylase/N-sulfotr...    31   7.6  
BC110588-1|AAI10589.1|  883|Homo sapiens N-deacetylase/N-sulfotr...    31   7.6  
BC035711-1|AAH35711.1|  883|Homo sapiens N-deacetylase/N-sulfotr...    31   7.6  
AF042084-1|AAB97086.1|  883|Homo sapiens heparan glucosaminyl N-...    31   7.6  
AB208870-1|BAD92107.1|  364|Homo sapiens N-deacetylase/N-sulfotr...    31   7.6  

>BX537519-1|CAD97771.1|  166|Homo sapiens hypothetical protein
           protein.
          Length = 166

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -1

Query: 621 LNKFWNWYSTLETSSALCFQSLTCQYLSPSTILSSTSRIIFIMMSRIL 478
           L K  N YS  +TSS LC  S   +YL+P T+        ++ +SRI+
Sbjct: 110 LCKLPNQYSVHKTSSPLCTSSAITRYLNPCTLFFKCWVQTWVFLSRII 157


>U36601-1|AAC27120.1|  883|Homo sapiens heparan
           N-deacetylase/N-sulfotransferase-2 protein.
          Length = 883

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 377 SCRITASNLKLHSSLGL*RSCLXNPCA-----SQPGRCSPGPRSSDPW 249
           S ++    L LHS+LGL R    NP A     ++P R  PGP   D W
Sbjct: 181 SAQLKGFPLFLHSNLGL-RDYQVNPSAPLLHLTRPSRLEPGPLPGDDW 227


>BC110589-1|AAI10590.1|  883|Homo sapiens
           N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
           2 protein.
          Length = 883

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 377 SCRITASNLKLHSSLGL*RSCLXNPCA-----SQPGRCSPGPRSSDPW 249
           S ++    L LHS+LGL R    NP A     ++P R  PGP   D W
Sbjct: 181 SAQLKGFPLFLHSNLGL-RDYQVNPSAPLLHLTRPSRLEPGPLPGDDW 227


>BC110588-1|AAI10589.1|  883|Homo sapiens
           N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
           2 protein.
          Length = 883

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 377 SCRITASNLKLHSSLGL*RSCLXNPCA-----SQPGRCSPGPRSSDPW 249
           S ++    L LHS+LGL R    NP A     ++P R  PGP   D W
Sbjct: 181 SAQLKGFPLFLHSNLGL-RDYQVNPSAPLLHLTRPSRLEPGPLPGDDW 227


>BC035711-1|AAH35711.1|  883|Homo sapiens
           N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
           2 protein.
          Length = 883

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 377 SCRITASNLKLHSSLGL*RSCLXNPCA-----SQPGRCSPGPRSSDPW 249
           S ++    L LHS+LGL R    NP A     ++P R  PGP   D W
Sbjct: 181 SAQLKGFPLFLHSNLGL-RDYQVNPSAPLLHLTRPSRLEPGPLPGDDW 227


>AF042084-1|AAB97086.1|  883|Homo sapiens heparan glucosaminyl
           N-deacetylase/N-sulfotransferase-2 protein.
          Length = 883

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 377 SCRITASNLKLHSSLGL*RSCLXNPCA-----SQPGRCSPGPRSSDPW 249
           S ++    L LHS+LGL R    NP A     ++P R  PGP   D W
Sbjct: 181 SAQLKGFPLFLHSNLGL-RDYQVNPSAPLLHLTRPSRLEPGPLPGDDW 227


>AB208870-1|BAD92107.1|  364|Homo sapiens
           N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
           2 variant protein.
          Length = 364

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 377 SCRITASNLKLHSSLGL*RSCLXNPCA-----SQPGRCSPGPRSSDPW 249
           S ++    L LHS+LGL R    NP A     ++P R  PGP   D W
Sbjct: 168 SAQLKGFPLFLHSNLGL-RDYQVNPSAPLLHLTRPSRLEPGPLPGDDW 214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,632,309
Number of Sequences: 237096
Number of extensions: 2510309
Number of successful extensions: 6168
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6168
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)