Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P03
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 69 5e-12
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 69 5e-12
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 66 4e-11
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 59 4e-09
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 59 4e-09
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 57 2e-08
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 57 2e-08
03_01_0249 - 1935355-1935827,1936129-1936330 56 4e-08
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 53 4e-07
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 52 5e-07
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 51 1e-06
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 51 1e-06
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 50 2e-06
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 49 6e-06
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 47 2e-05
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 46 4e-05
09_04_0448 + 17692650-17692970,17693461-17693811 43 4e-04
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 42 7e-04
03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 42 7e-04
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 41 0.001
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 39 0.005
05_04_0304 - 20048518-20049003,20049074-20049412 38 0.011
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 37 0.019
01_07_0182 + 41838805-41839152,41839230-41839610 37 0.025
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 36 0.033
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 36 0.043
10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041 36 0.057
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 36 0.057
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 35 0.10
07_01_0489 + 3694562-3695269 35 0.10
01_07_0183 + 41840089-41840394,41840869-41841249 33 0.40
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 32 0.54
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 31 1.6
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331... 31 1.6
09_01_0126 + 1896155-1896253,1897425-1897969,1898303-1898384,189... 30 2.9
03_05_1000 - 29588532-29588768,29589461-29589782,29589875-29590233 29 3.8
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 29 5.0
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 29 5.0
10_02_0035 - 4429737-4429781,4430769-4430890,4431000-4431297,443... 29 6.6
02_03_0101 + 15233783-15234601 29 6.6
11_08_0103 + 28372357-28372771,28374025-28374197 28 8.7
10_07_0097 - 12837998-12838336,12839201-12839317,12839737-128398... 28 8.7
04_04_1090 - 30764340-30764704,30765092-30765204,30765414-307656... 28 8.7
04_03_1007 - 21670780-21671368,21671477-21671685 28 8.7
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 68.9 bits (161), Expect = 5e-12
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKAR 397
+D GE P++L NP VP L D L +WESRAI Y+ K K L D K
Sbjct: 34 LDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK-NKPELLKDGDLKES 92
Query: 398 ALVDQRLYFDIGTLYQRFSDYFY-----PQVFAGAPADKAKN---EKVQEALQLLDKFLE 553
A+VD L + + + P +F P +K EK+++ L++ + L
Sbjct: 93 AMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLT 152
Query: 554 GQKYVAGPNLTVADLSLIASVSSLEASD--IDFKKYANVKRWY 676
KY+AG ++VADLS +A L A+ Y +VK W+
Sbjct: 153 KCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWW 195
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 68.9 bits (161), Expect = 5e-12
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDPK 391
VD GEQ PE+++ NP +P L D L ++ESRAI Y++ KY +K L D +
Sbjct: 34 VDFLAGEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIR 93
Query: 392 ARALVDQRLYFDIGTLYQRFSDYFYP----QVFAGAPADK----AKNEKVQEALQLLDKF 547
ALVD + Y S + + G P ++ EK+++ L+ +
Sbjct: 94 EAALVDVWTEVEAHQYYPALSPIVFECIIFPIMRGVPTNQQVVHESLEKLKKVLETYEAR 153
Query: 548 LEGQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETVKS 691
L G +Y+AG L+ ADL+ A+ F Y +VK W+E + S
Sbjct: 154 LSGSRYLAGDFLSFADLNHFPFTFYFMATPCASLFDAYPHVKAWWEGLMS 203
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 66.1 bits (154), Expect = 4e-11
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKAR 397
VD+ GE +P ++ NP VP D L+++ESRAI Y++ K+ GS L E +
Sbjct: 34 VDMSTGEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKH--GSDLLRESNLSE 91
Query: 398 -ALVD-----QRLYFDIGTLYQRFSDYFYPQVFAGAPADKAKN---EKVQEALQLLDKFL 550
A+VD + +FD F + P GA N EK+++AL++ + L
Sbjct: 92 SAMVDVWLEVESSHFDGAMSPIIFQCFIVPMFMGGATDIGVVNESLEKLKKALEVYEAQL 151
Query: 551 EGQKYVAGPNLTVADLSLIASVSSLEAS--DIDFKKYANVKRWYETV 685
KY+AG +++AD+S +V L AS + Y VK W + V
Sbjct: 152 SKSKYLAGDFISLADISHFPTVYYLLASAHASVLEAYPRVKAWIDDV 198
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 59.3 bits (137), Expect = 4e-09
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Frame = +2
Query: 248 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 427
P+Y K+NP +P LVD L + +S AI YL +KY + +L P+D K +AL + ++
Sbjct: 42 PDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKYPQ-HALLPKDLKKKAL-NLQIANI 99
Query: 428 IGTLYQRFSDYFYPQVFAG--APADKAK--NEKVQEALQLLDKFLEGQ--KYVAGPNLTV 589
+ + Q Y + G +P + + + + + ++K LEG KY G + +
Sbjct: 100 VCSSIQPLQGYAVIGLHEGKLSPDESLQIVQHYIDKGFKAIEKLLEGSNFKYATGDEVQL 159
Query: 590 ADLSLIASV-SSLEASDIDFKKYANVKRWYET 682
D+ L + + + ID KY N+ R ++T
Sbjct: 160 GDVFLAPQIHAGINRFQIDITKYPNLARLHDT 191
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 59.3 bits (137), Expect = 4e-09
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-AKGSSLYPEDPKA 394
VDL +P +L LNP +P L D ++ESRAI Y+ KY A+G+ L P + +
Sbjct: 38 VDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADLLPAE-AS 96
Query: 395 RALVDQRLYFDIGTLYQRFSDYFY----PQVFAGAPADKAKNEKVQEALQLLDKF---LE 553
A ++ L + Y S + + GA A +E Q+LD + L
Sbjct: 97 PAKLEVWLEVESHHFYPAISGLVFQLLIKPLLGGATDTAAVDEHAAALAQVLDVYDAHLA 156
Query: 554 GQKYVAGPNLTVAD---LSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGYRR 712
G +Y+AG ++AD +S + +S +++ + +VK W++ + S+ P +++
Sbjct: 157 GSRYLAGNRFSLADANHMSYLLFLSKTPMAELVASR-PHVKAWWDDI-SSRPAWKK 210
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 56.8 bits (131), Expect = 2e-08
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSS--LYPEDPK 391
+D E PE++KL T ++ +SRAI YL ++ + +Y
Sbjct: 35 IDTFKKEHKLPEFIKLRDPTGQVTFKHGDKTLVDSRAICRYLSTQFPDDGNRTIYGTGSL 94
Query: 392 ARALVDQRLYFDIGTLYQRFSDYFYPQVFA---GAPADKAK---NE-KVQEALQLLDKFL 550
RA ++Q L + + S+ + FA PAD+A+ NE K+Q+ L + D+ L
Sbjct: 95 ERASIEQWLQAEAQSFDAPSSELVFHLAFAPQLNIPADEARIAENERKLQQMLNVYDEIL 154
Query: 551 EGQKYVAGPNLTVADLS------LIASVSSLEASDIDFKKYANVKRWYETVKSTA 697
KY+AG T+ADLS I + S + F +V RWYE + + A
Sbjct: 155 AKNKYLAGDEFTLADLSHLPNSHYIVNARSPRGKKL-FTSKKHVARWYEEISNRA 208
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 56.8 bits (131), Expect = 2e-08
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDPK 391
+D E PE+LK NP +P D L ++ESRA+ Y++ KY ++ + L +
Sbjct: 34 IDFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLT 93
Query: 392 ARALVDQRLYFDIGTLYQRFSDYFYPQVF----AGAPADKA----KNEKVQEALQLLDKF 547
A+VD + +I Y S Y +F G P ++ EK+++ L++ +
Sbjct: 94 EAAMVDIGIEVEIHQYYPVISSIVYECLFNPAMYGVPTNQKVVDNSLEKLKKVLEVYEAR 153
Query: 548 LEGQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETVKSTAPGYRRPT 718
L Y+AG L+ DLS A+ KY +VK W++ + + P ++ T
Sbjct: 154 LSQNTYLAGNFLSFVDLSHFPFTFYFMATPYASLLDKYPHVKAWWDGL-AARPSIKKVT 211
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 56.0 bits (129), Expect = 4e-08
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSL----YPED 385
VD+ GE P +LKL P VP D +++ESRAI Y+ ++YA + ED
Sbjct: 35 VDMSKGEHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSGNKTLMGRKED 94
Query: 386 -PKARALVDQRL-----YFDIGTLYQRFSDYFYPQVFAGAPADKA---KNE-KVQEALQL 535
RA +++ + F+ +L F F P F G D A +NE K+ + L +
Sbjct: 95 GAVGRAAIEKWIEAEGQSFNPPSLAMAFQLAFAP--FMGRATDMAVVEQNEAKLVKVLDV 152
Query: 536 LDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDID---FKKYANVKRWYETVKSTAPGY 706
+++L +Y AG ++ADL + + L F + N+ RW++ V S P +
Sbjct: 153 YEQWLGENQYFAGDEFSLADLVHMPNTDLLVRKTNKAGLFTERKNLARWWDEV-SARPSW 211
Query: 707 RR 712
++
Sbjct: 212 KK 213
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 52.8 bits (121), Expect = 4e-07
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVD-DGLSIWESRAIITYLVNKYAKGSSLYPEDPKA 394
++L EQ PE+ KLNP VP LVD D + +S AI+ YL + Y + L P+DPK
Sbjct: 56 INLLANEQSHPEFEKLNPMKYVPALVDGDDTVVVDSFAILLYLEDTYPQ-HPLLPQDPKM 114
Query: 395 RALVDQRLYFDIGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQ----LLDKFLEG-- 556
+AL + ++ +G+ Q + + K +Q L L+K L+G
Sbjct: 115 KAL-NIQIASIVGSSIQPLQNNSVLDFIEEKLDSQEKVNWIQYHLNRGFTALEKMLKGCT 173
Query: 557 QKYVAGPNLTVADLSLIASV-SSLEASDIDFKKYANVKRWYE 679
Y G + + DL L + ++ ID Y + R +E
Sbjct: 174 TTYATGDEIQLGDLFLEPQIYGGIKRFGIDMTNYPTLARLHE 215
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 52.4 bits (120), Expect = 5e-07
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Frame = +2
Query: 233 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPE--DPKARALV 406
G+ +PE+L NP +P L D L++++SRAI Y+ KY E + A+V
Sbjct: 39 GDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMV 98
Query: 407 DQRLYFDIGTLYQRFSDYFYPQV---FAGAPADKA----KNEKVQEALQLLDKFLEGQKY 565
D L + + + F G D+ K+++ L + + L G +Y
Sbjct: 99 DVWLDVEAHQHEAAVRPILWHCIINKFEGRDRDQGVVDESVRKLEKVLGVYEARLSGSRY 158
Query: 566 VAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETV 685
+AG +++ADLS +++ A++ Y +VK W+E +
Sbjct: 159 LAGDRISLADLSHFSNMRYFMATEYAGVVDAYPHVKAWWEAL 200
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 51.2 bits (117), Expect = 1e-06
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +2
Query: 248 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 427
P+Y K+NP VP LVD +I +S AII YL +KY + L P+D K +AL Q
Sbjct: 44 PDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKYPQ-HPLLPQDLKKKALNMQ----- 97
Query: 428 IGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEG--QKYVAGPNLTVADLS 601
G + S Q+ + + ++K LEG KY G + +AD+
Sbjct: 98 -GLADGKMSANESLQIV---------QHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVF 147
Query: 602 LIASV-SSLEASDIDFKKYANVKRWYE 679
L + + + ID KY + R+Y+
Sbjct: 148 LAPQIHAGITRFQIDMSKYPILARFYK 174
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKAR 397
V+L GE PE++K+NP VP LVD I +S AI YL +KY + L P+D K +
Sbjct: 44 VNLLKGEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKYPE-HPLLPQDLKMK 102
Query: 398 AL 403
AL
Sbjct: 103 AL 104
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 50.0 bits (114), Expect = 2e-06
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-AKGSSLYPE-DPK 391
VD E PE+LK NP +P D L ++ESRAI Y++ KY + + L E + +
Sbjct: 34 VDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLR 93
Query: 392 ARALVDQRLYFDIGTLYQRFSDYFYPQV----FAGAPADK----AKNEKVQEALQLLDKF 547
A+VD + S Y + G P ++ EK+++ L++ +
Sbjct: 94 EAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEAR 153
Query: 548 LEGQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYE 679
L Y+AG ++ ADL+ + F Y +VK W+E
Sbjct: 154 LSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWE 199
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 48.8 bits (111), Expect = 6e-06
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKAR 397
VD+ GE +L +P +P D ++++ESRAI Y++ Y K L + +
Sbjct: 33 VDMAAGENRSRHHLARSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEES 92
Query: 398 ALVDQRL-----YFDIGTLYQRFSDYFYPQVFAGAPADKA---KN-EKVQEALQLLDKFL 550
A+VD + ++D ++ + + G D+A +N EK+++ L++ ++ L
Sbjct: 93 AMVDMWMEVEAHHYD-PAIFHIIRECVIKPMIGGGARDQAIVDENVEKLRKVLEVYERRL 151
Query: 551 EGQKYVAGPNLTVADLS 601
+Y+AG ++VADL+
Sbjct: 152 SESEYLAGDFVSVADLN 168
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAK 361
VD + G Q P+YLKL P T DD L++ ESR I+ ++ +KYA+
Sbjct: 36 VDAYRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKYAR 83
Score = 36.7 bits (81), Expect = 0.025
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 494 DKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEA---SDIDFKKYANV 664
+K+K + +++ L + ++ LE Y+AG T+ADLS + + L + S F+ NV
Sbjct: 192 EKSKKD-LEKLLDIYEQRLEEAAYLAGDKFTIADLSHLPNADRLASDPRSRRMFEARKNV 250
Query: 665 KRWYETVKS 691
RW+ + S
Sbjct: 251 SRWWNNISS 259
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 46.0 bits (104), Expect = 4e-05
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPE-DPKA 394
+D E PE+ NP VP L D L ++ESRAI Y++ K S L E +
Sbjct: 33 IDFSIAEHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK--NNSELLKEHNLSD 90
Query: 395 RALVDQRL-----YFDIGTLYQRFSDYFYPQVFAG---APADKAKNEKVQEALQLLDKFL 550
A VD L +FD + P F G A + EK+++ Q+ ++ L
Sbjct: 91 AAKVDVWLEAESHHFDEPMSVVIYQCLILPVYFGGQTDAKVVEENLEKLKKTFQVYEERL 150
Query: 551 EGQKYVAGPNLTVADLS 601
+Y+AG L++ADLS
Sbjct: 151 CKFRYLAGDFLSLADLS 167
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 42.7 bits (96), Expect = 4e-04
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 257 LKLNP-QHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIG 433
L+ NP VP LV DG + ES I+ Y+ + G + P DP RA + F
Sbjct: 47 LRHNPVTKKVPVLVHDGKPLAESTVIVEYIDEAWKHGYPIMPSDPFDRA----QARFWAR 102
Query: 434 TLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADL 598
++ + YP + + Q+ L+ L+ LEG+K+ G D+
Sbjct: 103 FAEEKCNAALYPIFMTTGEEQRKLVHEAQQCLKTLETALEGKKFFGGDAFGYLDI 157
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 41.9 bits (94), Expect = 7e-04
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = +2
Query: 248 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 427
PE+LK+NP +P L +++ES AI Y V + SSL + ++Q + F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARY-VARLKDNSSLCGSSLIDYSHIEQWMDFS 125
Query: 428 IGTLYQRFSDYFYPQVFAG--APA-DKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADL 598
+ + YP++ G P ++ ++ +L L+ L Y+ G ++T+AD+
Sbjct: 126 ATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADI 185
Query: 599 SLIASV 616
+ ++
Sbjct: 186 VMTCNL 191
>03_01_0248 -
1932992-1933423,1933440-1933489,1933558-1933606,
1933688-1933840
Length = 227
Score = 41.9 bits (94), Expect = 7e-04
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 500 AKNEK-VQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYA---NVK 667
A+NEK +Q+ L + D+ L +Y+AG T+ADLS + + + +S+ K + NV
Sbjct: 141 AENEKKLQQVLNVYDEILSKNEYLAGDEFTLADLSHLPNSHYIVSSERGRKLFTGRKNVA 200
Query: 668 RWYETV 685
RWY+ +
Sbjct: 201 RWYDQI 206
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Frame = +2
Query: 248 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYL--------VNKYAKGSSLYPEDPKARAL 403
PEYLK+NP VP L ++ES AI Y+ V + + LY A
Sbjct: 604 PEYLKMNPIGKVPILETPDGPVFESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAH 663
Query: 404 VDQRLYFDIGTLYQRFSDYFYPQV-FAG--APADKAKNEKVQEALQLLDKFLEGQKYVAG 574
++Q + F + + +P++ FA A +++A ++ +L L+ L Y+ G
Sbjct: 664 IEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVG 723
Query: 575 PNLTVADLSLIASV 616
++T+AD+ + ++
Sbjct: 724 HSVTLADIVMTCNL 737
Score = 38.3 bits (85), Expect = 0.008
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Frame = +2
Query: 248 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYL--------VNKYAKGSSLYPEDPKARAL 403
PE+LK+NP +P L ++ES AI Y+ V + + LY A
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAH 102
Query: 404 VDQRLYFDIGTLYQRFSDYFYPQVFAG---APADKAKNEKVQEALQLLDKFLEGQKYVAG 574
++Q F + + YP++ A +++A ++ +L L+ L Y+ G
Sbjct: 103 IEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVG 162
Query: 575 PNLTVADLSLIASV 616
++T+AD+ + ++
Sbjct: 163 HSVTLADIVMTCNL 176
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 355
VD G + P+YLKL P T D +++ ESR II ++ +KY
Sbjct: 35 VDSFRGSKRMPQYLKLQPHGEALTFEDGNVTLVESRKIIRHIADKY 80
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 506 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFK---KYANVKRWY 676
++++ + L + ++ LE +Y+AG T+ADLS + + L A + NV RW+
Sbjct: 194 SKELSKVLDIYEQRLEEAEYLAGDKFTLADLSHLPNADRLAADPRTLRMLQSRRNVSRWW 253
Query: 677 ETV 685
V
Sbjct: 254 ADV 256
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 257 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARAL 403
L+LNP H VP LV G + ES I+ YL + + + L P DP RAL
Sbjct: 53 LRLNPVHKKVPVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRAL 102
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 37.1 bits (82), Expect = 0.019
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 257 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIG 433
L NP H VP L+ S+ ES I+ Y+ + G + P DP RA+ F I
Sbjct: 320 LNHNPVHKLVPVLLHGDRSLSESLVILEYIDESF-HGPPILPTDPYDRAVARFWAQF-ID 377
Query: 434 TLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLS 601
+ RF +++ P V + +E L LL+ L+G+++ G + D++
Sbjct: 378 QKFGRF-NFWIPFVQMEGNMQDCFVREAKENLALLEGQLKGRRFFGGDAIGFLDIA 432
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 36.7 bits (81), Expect = 0.025
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Frame = +2
Query: 257 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYF--- 424
L NP H VP L+D G +I ES I+ Y+ + + G + P DP RA F
Sbjct: 45 LASNPVHKKVPVLLDGGRAICESLVIVEYVDDAF-DGPPILPADPYDRATARFWAQFIDH 103
Query: 425 --DIGTLYQRFSDYFYPQVFA---GAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTV 589
++ L P + A K ++ +E L LL+ LEG+++ AG +
Sbjct: 104 KANLFMLLHHCVHCTLPLLLALWLDGEEQKGFLKETKENLSLLEAQLEGKRFFAGDAVGY 163
Query: 590 ADLS 601
D++
Sbjct: 164 LDVA 167
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 36.3 bits (80), Expect = 0.033
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +2
Query: 230 HGEQLKPEYLKLNPQHTVPTLVDD--GLSIWESRAIITYLVNKYAKGS 367
+G +P+ L++ + P +VD G++++ES AII YL +KY G+
Sbjct: 178 NGPTFRPKVLEMGGKQQFPYMVDPNTGVAMYESDAIIKYLADKYGDGT 225
>03_04_0016 +
16461542-16461566,16462701-16462732,16463015-16463100,
16463189-16463305,16463399-16463474,16463695-16463818,
16464482-16464595,16464700-16464947
Length = 273
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 506 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 685
N + LQ LD++L + Y++G + D+++ S+ S A+ Y NV RWY+ +
Sbjct: 26 NVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAAS-----YVNVTRWYDHI 80
Query: 686 KS 691
+
Sbjct: 81 SA 82
>10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041
Length = 279
Score = 35.5 bits (78), Expect = 0.057
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 257 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDP 388
L NP H VP L+ +G I ESR I+ Y++++ G++L P DP
Sbjct: 67 LASNPVHKKVPVLIHNGKPICESRIILEYIIDEVFPVDGAALLPADP 113
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 35.5 bits (78), Expect = 0.057
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 521 EALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 685
+ L+ L++ L G+ YV+G ++ D+ + A+V S ++ + N RWY+TV
Sbjct: 12 DGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAE-----FPNAARWYDTV 61
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 34.7 bits (76), Expect = 0.10
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 218 VDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWE 319
VDL E L PE+ K+NP VP +VD ++E
Sbjct: 35 VDLFKREHLSPEFKKINPMGQVPAIVDGRFRLFE 68
>07_01_0489 + 3694562-3695269
Length = 235
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 257 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY---AKGSSLYPEDPKARAL 403
L NP H VP L+ I ES+ I+ YL + + A G L P DP ARA+
Sbjct: 54 LASNPVHKKVPVLLHRSNPICESQVIVQYLDDAFPGGAAGGDLLPSDPHARAV 106
>01_07_0183 + 41840089-41840394,41840869-41841249
Length = 228
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 266 NPQHT-VPTLV-DDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARA 400
NP H VP L+ DG S+ ES ++ Y+ + + G L P DP ARA
Sbjct: 45 NPVHKLVPVLLHSDGRSVAESLVVVQYVDDAF-HGPPLLPADPYARA 90
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 32.3 bits (70), Expect = 0.54
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 524 ALQLLDKFLEGQKYVAGPNLTVADLSL---IASVSSLEASDIDFKKYANVKRWYETVKS 691
A +D +L + ++ G LT+AD+++ +A + S KKY N+ RW+ + S
Sbjct: 96 ACSFVDGYLMSRTFLVGHVLTIADITVWSNLAGIGQRWESLRKSKKYQNLVRWFNGIDS 154
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 30.7 bits (66), Expect = 1.6
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Frame = +2
Query: 245 KPE-YLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGS-SLYPEDPKARALVDQRL 418
KP+ +LK++P+ VP + + + +S I + KY + S + PE +
Sbjct: 107 KPDWFLKISPEGKVPIVKLEEQWVADSDVITQAIEEKYPEPSLATPPEKASVILTIGNNF 166
Query: 419 YFDIGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFL-EGQKYVAGPNLTVAD 595
+ ++ F + + P D + + E L D +L + ++ G ++ AD
Sbjct: 167 LYSGSKIFSTFIGFLKSK----DPNDGTEQALLSE-LTSFDSYLKDNGPFINGETISAAD 221
Query: 596 LSLIASVSSLEASDIDFKKY------ANVKRWYETVKS 691
LSL + +E + +K + ++VK++ +T+ S
Sbjct: 222 LSLAPKLYHMEIALGHYKNWSVPDSLSHVKKYMKTIFS 259
>02_02_0661 -
12731005-12731238,12732756-12732884,12732969-12733193,
12733302-12733478,12733576-12733788
Length = 325
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 488 PADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSL-EASDIDFKKYANV 664
P D+A ++ EAL ++ L Q+Y+ G LT AD+ L ++ E + FK +
Sbjct: 202 PYDEAVT-RLYEALDKCEEILSRQRYICGNQLTEADVRLFVTLIRFDEVYAVHFKCNKRL 260
Query: 665 KRWY 676
R Y
Sbjct: 261 LREY 264
>09_01_0126 +
1896155-1896253,1897425-1897969,1898303-1898384,
1898710-1898832
Length = 282
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 145 PGSAPCRXCTADGEGAQLKPEPQTGRPTPRGTAQTR-IFEVEPSTHGPDPSRRWS 306
P PCR T+ +G P+ GRP PR +++R E S P S+R S
Sbjct: 180 PLPIPCRQETSAVQGLDEDPDGNGGRPHPRYRSRSRGTREARSSKKTPRESKRLS 234
>03_05_1000 - 29588532-29588768,29589461-29589782,29589875-29590233
Length = 305
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +1
Query: 466 SPSIRRCPSRQGQEREGTGSPSAAGQVPRRSEVRGRTEPHRRR 594
S S RR PS+Q G+GS S P + R PHRRR
Sbjct: 11 SVSARRLPSKQPGRHGGSGSSSVPNPYPLFATT--RLLPHRRR 51
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 175 ADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGPDPSRRWSFNLGVPRHH 333
A+GE + + PQ P PRGT R +G +RR N+ R H
Sbjct: 266 ANGEDPERRESPQRATPPPRGTGDLR-----DQINGRQEARRTRDNVNRSRRH 313
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 518 QEALQLLDKFLEGQKYVAGPNLTVADL---SLIASVSSLEASDIDFKKYANVKRWYETV 685
+ A LD +L + ++ L++AD+ S +A S KKY N+ RW+ ++
Sbjct: 96 EAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSI 154
>10_02_0035 -
4429737-4429781,4430769-4430890,4431000-4431297,
4431644-4431682
Length = 167
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 490 SRQGQEREGTGSPSAAGQVPRRSEVRGRTEPHRRRPESHRQCLQPGS 630
+R +R+G +P +G RRS GR + R+ E C QP S
Sbjct: 52 ARGSSDRQGAAAPRGSGVEQRRSGWPGR-QARGRQQEEQVSCEQPRS 97
>02_03_0101 + 15233783-15234601
Length = 272
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 151 SAPCRXCTADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGPD 288
SAP R TA A +P PTPR ++ + EP H D
Sbjct: 182 SAPARHATASLGCAAAQPPQVPPTPTPRRRRRSMMVHPEPPEHTTD 227
>11_08_0103 + 28372357-28372771,28374025-28374197
Length = 195
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +1
Query: 499 GQEREGTGSPSAAGQVPRRSEVRGRTEPHRRRPESHRQCLQPGSL*H*LQEIRQR*EMVR 678
G+E G +AA + R RGR PHRR G + R ++
Sbjct: 42 GEEVASIGEGAAATLLCRGEGFRGRWHPHRREAHGGGGGALTGGAQEATKRFRTGSDVGN 101
Query: 679 DG*EYSSGLQEANE 720
G + G++EA+E
Sbjct: 102 RGGVFGGGVEEASE 115
>10_07_0097 -
12837998-12838336,12839201-12839317,12839737-12839868,
12840656-12840907
Length = 279
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 284 PTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRL 418
PT+++D L ++ + L N ++ +YP DPKA+ VD L
Sbjct: 160 PTVMED-LQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDL 203
>04_04_1090 - 30764340-30764704,30765092-30765204,30765414-30765638,
30766432-30766553,30766617-30767174,30769207-30769477,
30772175-30773256
Length = 911
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +1
Query: 484 CPSRQGQEREGTGSPSAAGQ----VPRRSEVRGRTEPHRRRPESHRQCLQPGS 630
C +R+G R G G+ PR+ V+G RRR E R+ P S
Sbjct: 842 CAARRGAARRAEGDIVGGGKPSSHAPRQDRVQGDGHRARRRREERRRLPPPSS 894
>04_03_1007 - 21670780-21671368,21671477-21671685
Length = 265
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 497 KAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK--- 667
K E++ + L ++ L KY+AG + AD I ++ + D+D ++Y N +
Sbjct: 161 KQSEEELSKLLDDVEAQLNNGKYLAGDEFSPADSVFIPILARITLLDLD-EEYINCRPRL 219
Query: 668 RWYETVKSTAPGYR 709
Y T+ P Y+
Sbjct: 220 LEYYTLVKQRPSYK 233
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,760,698
Number of Sequences: 37544
Number of extensions: 432340
Number of successful extensions: 1392
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -