Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P02
         (919 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-173|AAF52078.2|  246|Drosophila melanogaster CG14661-PA...    32   1.3  
AF145628-1|AAD38603.1|  262|Drosophila melanogaster BcDNA.GH0553...    29   6.8  
AE014134-2310|AAF53270.1|  262|Drosophila melanogaster CG5867-PA...    29   6.8  

>AE014297-173|AAF52078.2|  246|Drosophila melanogaster CG14661-PA
           protein.
          Length = 246

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 167 PKDTACLKSSAQKAXPXLAAGITDLGXETMDPMTXG 274
           P+ + CLKSS     P LA GI +L    ++P+  G
Sbjct: 35  PELSKCLKSSVHNLRPYLAKGIKELNVPPLEPLYIG 70


>AF145628-1|AAD38603.1|  262|Drosophila melanogaster BcDNA.GH05536
           protein.
          Length = 262

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 152 ITPCRPKD---TACLKSSAQKAXPXLAAGITDLGXETMDPMTXGR 277
           I  CR  D   + C+K   Q+  P +  GI++L    +DP   G+
Sbjct: 39  IPTCREGDINISECIKQGLQQITPRMKYGISELNIPPLDPFEMGK 83


>AE014134-2310|AAF53270.1|  262|Drosophila melanogaster CG5867-PA
           protein.
          Length = 262

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 152 ITPCRPKD---TACLKSSAQKAXPXLAAGITDLGXETMDPMTXGR 277
           I  CR  D   + C+K   Q+  P +  GI++L    +DP   G+
Sbjct: 39  IPTCREGDINISECIKQGLQQITPRMKYGISELNIPPLDPFEMGK 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,675,835
Number of Sequences: 53049
Number of extensions: 359545
Number of successful extensions: 542
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)