Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O24
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   5.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   9.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   9.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   9.0  

>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 265 NMWSP*PFLLCXSMFTIKCTNHK 197
           ++W P P+ L   +  I   NHK
Sbjct: 70  SLWQPDPYFLNAKVSEIAALNHK 92


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 390 LRPMRCSRILTKGEFMIKVVNK 455
           L  +R   +L KG F I+++NK
Sbjct: 468 LTALRKRDVLKKGNFTIEILNK 489


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 5   LSXPPLAGW 31
           +S PPLAGW
Sbjct: 167 ISSPPLAGW 175


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 5   LSXPPLAGW 31
           +S PPLAGW
Sbjct: 167 ISSPPLAGW 175


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 5   LSXPPLAGW 31
           +S PPLAGW
Sbjct: 167 ISSPPLAGW 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,607
Number of Sequences: 438
Number of extensions: 4016
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)