Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O22
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68227-10|CAA92515.1|   95|Caenorhabditis elegans Hypothetical p...    58   1e-08
U97593-4|AAB52877.2|   93|Caenorhabditis elegans Hypothetical pr...    37   0.022
Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z68227-10|CAA92515.1|   95|Caenorhabditis elegans Hypothetical
           protein F49C12.12 protein.
          Length = 95

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = +3

Query: 123 CKLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFD-EKNPPHSIED 284
           C L GPK+S   +V+SVWG+I L L+GVF+YI+AV L  DL F+     P S+ D
Sbjct: 5   CPLMGPKMSAFCMVMSVWGVIFLGLLGVFFYIQAVTLFPDLHFEGHGKVPSSVID 59



 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 322 AQNCWIAALLYLITLVVSGHQFWLNNRSSVSM 417
           A  CWIAA LY +TL+     FW N  ++  +
Sbjct: 66  ATQCWIAAGLYAVTLIA---VFWQNKYNTAQI 94


>U97593-4|AAB52877.2|   93|Caenorhabditis elegans Hypothetical
           protein C46G7.1 protein.
          Length = 93

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 135 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEK 260
           GP  +   L L++WG + + ++G  +Y ++V L EDLP + K
Sbjct: 3   GPMCTGIFLFLALWGTVFMAILGGLFYNQSVGLFEDLPKESK 44


>Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical
           protein F58B4.1b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 649 NNPLPFASKFFQHIATSHQPTYLNKFFNYF 738
           NN  PF S FF +   S    Y NK  NY+
Sbjct: 567 NNASPFGSNFFNNNYNSFNNWYTNKNKNYY 596


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,950,940
Number of Sequences: 27780
Number of extensions: 391874
Number of successful extensions: 989
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)