Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O16
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848...    29   5.1  
01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,423...    29   5.1  

>02_04_0179 +
           20682852-20684510,20684593-20684661,20684741-20684809,
           20686779-20688206
          Length = 1074

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = -1

Query: 485 QSESAEKXSQTIQYNVSRSTX*EDGQVIVS-LEELLFSTNI---FGKLVDKECSSQASDS 318
           + E+ E  +Q ++   SR    E G+ ++  + E  F   +   F KL D+      + S
Sbjct: 319 EEETPEAKAQRLEEEKSRRRWKERGEALLQEILEAAFEALLAGEFNKLKDQWRQCLLTFS 378

Query: 317 FFQVRHKLXRSQSRTGWY 264
           FF V HK+ + Q+ T W+
Sbjct: 379 FFPVNHKV-KKQAVTYWW 395


>01_01_0571 -
           4233769-4234239,4234340-4234378,4234712-4234839,
           4235329-4235470,4235519-4235905,4236045-4236230,
           4236382-4236659,4236757-4236883,4237270-4237442,
           4237610-4237657,4237734-4237767,4237837-4237965,
           4238865-4238960,4239419-4239485,4240030-4240085,
           4240522-4240617,4241127-4242222,4243221-4243402
          Length = 1244

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 479 ESAEKXSQTIQYNVSRSTX*EDGQVIVSLEELLFSTNIFG 360
           E A K  + + Y+V R+    DGQ +V+LE  +FS N  G
Sbjct: 661 EDALKNGEVLAYHVYRTCLRMDGQTLVNLE--IFSNNFDG 698


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,040,565
Number of Sequences: 37544
Number of extensions: 315546
Number of successful extensions: 675
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)