Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O16
         (902 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81524-1|AAB82735.1|   79|Homo sapiens cytochrome c oxidase subu...    38   0.038
M83186-1|AAA52166.1|   79|Homo sapiens cytochrome c oxidase subu...    38   0.038
CR542120-1|CAG46917.1|   79|Homo sapiens COX7A1 protein.               38   0.038
BT006924-1|AAP35570.1|   79|Homo sapiens cytochrome c oxidase su...    38   0.038
BC002757-1|AAH02757.1|   79|Homo sapiens cytochrome c oxidase su...    38   0.038
AF127789-1|AAF72747.1|   79|Homo sapiens cytochrome c oxidase po...    38   0.038
AF037372-1|AAB92616.1|   79|Homo sapiens cytochrome oxidase subu...    38   0.038
AC002984-2|AAB81547.1|   79|Homo sapiens COXK_HUMAN protein.           38   0.038
Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.    30   10.0 
U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.        30   10.0 

>U81524-1|AAB82735.1|   79|Homo sapiens cytochrome c oxidase subunit
           VIIa-M protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>M83186-1|AAA52166.1|   79|Homo sapiens cytochrome c oxidase subunit
           VIIa protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>CR542120-1|CAG46917.1|   79|Homo sapiens COX7A1 protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>BT006924-1|AAP35570.1|   79|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 1 (muscle) protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>BC002757-1|AAH02757.1|   79|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 1 (muscle) protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>AF127789-1|AAF72747.1|   79|Homo sapiens cytochrome c oxidase
           polypeptide VIIa-heart precursor protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>AF037372-1|AAB92616.1|   79|Homo sapiens cytochrome oxidase subunit
           VIIa-H precursor protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>AC002984-2|AAB81547.1|   79|Homo sapiens COXK_HUMAN protein.
          Length = 79

 Score = 38.3 bits (85), Expect = 0.038
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 351 HQLPENIRRKQELFQRDNDLPVFLXGGPADVI 446
           ++    +R KQ+LFQ DND+P++L GG  D I
Sbjct: 20  NRFQNRVREKQKLFQEDNDIPLYLKGGIVDNI 51


>Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.
          Length = 2214

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 244  GSCNPVQYQPVLDCDRXSLCRTWKKESDAWDEHSLSTSFP 363
            G C P +++    CDR + C  W  E D  D H L  S P
Sbjct: 1379 GHCIPNRWK----CDRENDCGDWSDEKDCGDSHILPFSTP 1414


>U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.
          Length = 2214

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 244  GSCNPVQYQPVLDCDRXSLCRTWKKESDAWDEHSLSTSFP 363
            G C P +++    CDR + C  W  E D  D H L  S P
Sbjct: 1379 GHCIPNRWK----CDRENDCGDWSDEKDCGDSHILPFSTP 1414


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,092,981
Number of Sequences: 237096
Number of extensions: 1736683
Number of successful extensions: 4706
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4706
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)