Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O15
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713...    30   2.8  
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559...    29   6.5  
04_04_0963 - 29743363-29744450,29744729-29745043,29745116-297454...    28   8.6  

>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
            7139996-7140076,7140805-7140895,7141242-7141330,
            7141749-7141802,7141906-7142085,7142175-7142237,
            7142575-7142705,7142807-7142900,7143343-7143684,
            7143957-7144348,7145010-7148487,7149101-7149187,
            7149324-7149367,7149495-7149591,7150429-7150572
          Length = 1873

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3

Query: 480  TDAPEIPESEEIQTECKITSVLSDEVYEKALKESPKAQPNVCNTINSSVTVLE 638
            T+ P  PE++    + K   + SD+V++K  + +P  +    NT  SS+++ E
Sbjct: 1012 TEQPLEPENDASVEDEKPPEIESDDVHDKPSESTPDTETLPHNTPKSSISISE 1064


>01_06_0293 - 28254673-28254878,28255189-28255306,28255767-28255961,
            28256701-28256800,28256887-28256972,28257078-28257239,
            28257965-28258101,28258233-28258281,28258688-28258746,
            28258862-28258896,28259384-28259433,28260173-28260332,
            28260898-28260963,28261065-28261162,28261649-28261696,
            28262114-28262242,28262667-28262769,28262858-28262954,
            28263181-28263241,28263659-28263740,28263845-28263962,
            28264039-28266325
          Length = 1481

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 498  PESEEIQTECKITSVLSDEVYEK 566
            PE EE Q+ C++ S  SDE Y++
Sbjct: 1287 PEYEEFQSVCRVMSGFSDEFYKE 1309


>04_04_0963 -
           29743363-29744450,29744729-29745043,29745116-29745477,
           29745947-29746013,29746111-29746954
          Length = 891

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 124 KLALPSYGGKNLFSTVAVTAHQQHCNYPXLKDSLA 20
           K+ L SYG KN   +++     + C +  +K SLA
Sbjct: 444 KIILVSYGFKNSGKSISAALENRSCGFTGIKGSLA 478


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,021,918
Number of Sequences: 37544
Number of extensions: 374679
Number of successful extensions: 809
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)