Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_O10
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.13
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 34 0.13
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.13
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.17
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 32 0.51
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 32 0.67
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.67
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.89
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 31 1.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.1
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 6.3
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.3
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 8.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRPXXPSXXXPSQY--PHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
PP PP PGPP P P PS++ P + PP P PPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP------PPPGMRYPGGMPPPP 351
Query: 899 XPR 907
PR
Sbjct: 352 PPR 354
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +2
Query: 713 PXXXPPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPP 892
P P PP+P PG RP P PS PP G P PP
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPP----PSSGMWPPPPPPPPGRTPGP---PGMPGMPPP 319
Query: 893 PHXPRXRP 916
P R P
Sbjct: 320 PPPSRFGP 327
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +2
Query: 713 PXXXPPNXPPLPXXPG---PPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXX 883
P P PPLP PG P +P P P Q P PP P
Sbjct: 89 PLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPPPVPHPPQITQMAPILPTSPAPP 148
Query: 884 KPPPHXPR 907
P PH P+
Sbjct: 149 PPIPHPPQ 156
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRPXXPSXXXPSQY--PHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
PP PP PGPP P P PS++ P + PP P PPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP------PPPGMRYPGGMPPPP 361
Query: 899 XPR 907
PR
Sbjct: 362 PPR 364
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +2
Query: 713 PXXXPPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPP 892
P P PP+P PG RP P PS PP G P PP
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPP----PSSGMWPPPPPPPPGRTPGP---PGMPGMPPP 329
Query: 893 PHXPRXRP 916
P R P
Sbjct: 330 PPPSRFGP 337
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/110 (26%), Positives = 30/110 (27%)
Frame = +2
Query: 587 PXAPKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPLPXXPGPP 766
P PK PP PP PP P PP PP P PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP------PTGSPP-PPPAGGSPPPP 292
Query: 767 XRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXPRXRP 916
P P P T + PP P PPP R P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPRQKRQAP 340
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNX 868
PP P PP P G P P S P P PP G P +
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPPPR-- 293
Query: 869 XXRXXKPPPHXPRXRP 916
PPP PR P
Sbjct: 294 --AGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/110 (26%), Positives = 30/110 (27%)
Frame = +2
Query: 587 PXAPKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPLPXXPGPP 766
P PK PP PP PP P PP PP P PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP------PTGSPP-PPPAGGSPPPP 313
Query: 767 XRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXPRXRP 916
P P P T + PP P PPP R P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPRQKRQAP 361
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNX 868
PP P PP P G P P S P P PP G P +
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPPPR-- 314
Query: 869 XXRXXKPPPHXPRXRP 916
PPP PR P
Sbjct: 315 --AGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/110 (26%), Positives = 30/110 (27%)
Frame = +2
Query: 587 PXAPKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPLPXXPGPP 766
P PK PP PP PP P PP PP P PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP------PTGSPP-PPPAGGSPPPP 298
Query: 767 XRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXPRXRP 916
P P P T + PP P PPP R P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPRQKRQAP 346
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNX 868
PP P PP P G P P S P P PP G P +
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPPPR-- 299
Query: 869 XXRXXKPPPHXPRXRP 916
PPP PR P
Sbjct: 300 --AGSPPPPPPPRGSP 313
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPPLPXXPGPP--XRPXXP-SXXXPSQYP 811
P Q P PP PP+P P PP RP P PS YP
Sbjct: 61 PAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYP 104
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/64 (26%), Positives = 20/64 (31%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXP 904
PP P P PG P P P+ P P G P + PP H
Sbjct: 153 PPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSD 212
Query: 905 RXRP 916
+P
Sbjct: 213 EPKP 216
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPX-RPXXPSXXXP-SQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
P N P+P P P + P+ P + YP +P + P PPPH
Sbjct: 88 PQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPH 147
Query: 899 XPRXRPXP 922
P P P
Sbjct: 148 YPPPPPAP 155
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.89
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXP 904
PP PP P PP P P P Q+ + PP P PPP P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPM-----CPPPPPPMP 82
Query: 905 RXRP 916
P
Sbjct: 83 SYSP 86
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNX-PPLPXXPGPPXRPXXPSXXXP 799
PP P PP PP P P PP P P P
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXP 904
PP P P GP RP P P P T G+ P Q R PP P
Sbjct: 157 PPGQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQ---VRTVPAPPGNP 213
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/117 (23%), Positives = 30/117 (25%), Gaps = 8/117 (6%)
Frame = +2
Query: 596 PKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPLPXX------- 754
P PP HH P H P PP P
Sbjct: 78 PHQPPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSS 137
Query: 755 PGPPXRPXXPSXXXP-SQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXPRXRPXP 922
P PP P P P S P ++PP + P PP P P P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPP-LPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQN 865
PP+ PP PP +P P P P P +PP E P +
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRT 186
Query: 866 XXXRXXKPPP 895
PPP
Sbjct: 187 PPSPIPPPPP 196
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +2
Query: 638 PPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPLPXXPGPPXRPXXPSXXXP 799
PP V P P PP PP P PP P P P
Sbjct: 142 PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPP 835
PP P P PP P PGPP P P PP
Sbjct: 124 PPGHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRPQAPAAPPP 172
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/90 (24%), Positives = 26/90 (28%)
Frame = +2
Query: 566 TXGPVAGPXAPKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPL 745
T P + P + RPP + P PP P PP P
Sbjct: 104 TYSPYSRPSSSYGRPPQFYPAQPGPAVPAVIPPVVTQPIVPPPVPEVSEPVPEPPIPAPG 163
Query: 746 PXXPGPPXRPXXPSXXXPSQYPHTXXVSPP 835
P P P P P T V+PP
Sbjct: 164 PVAPPTPSGPLF-GGVEPGAGALTPGVAPP 192
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 713 PXXXPPNXPPLPXXPGPPXRPXXPS 787
P PP PP P P PP P PS
Sbjct: 350 PIISPPAPPPPPPPPPPPPPPQTPS 374
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/79 (25%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = +2
Query: 581 AGPXAPKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPP-QXXXHXPXXXPPNXPPLPXXP 757
+GP +P P + PPS PP P P PP P
Sbjct: 207 SGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTR 266
Query: 758 GPPXRPXXPSXXXPSQYPH 814
PP P P+ P H
Sbjct: 267 RPPGPPGPPTRRPPGHQGH 285
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRP--XXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
PP PP+ P PP P P P P + P G P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 899 XP 904
P
Sbjct: 776 PP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRP--XXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
PP PP+ P PP P P P P + P G P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 899 XP 904
P
Sbjct: 776 PP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRP--XXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
PP PP+ P PP P P P P + P G P PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 899 XP 904
P
Sbjct: 359 PP 360
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.8
Identities = 26/109 (23%), Positives = 30/109 (27%)
Frame = +2
Query: 572 GPVAGPXAPKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPLPX 751
GP G P P ++ PP PPQ P PP P
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPG----QPYGPPGGYPPQQQRPPYQAQPYPGPPPPQ 727
Query: 752 XPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
P P P Q P+ PP G+ P Q P H
Sbjct: 728 QQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQ-YQPQQQQGGPMGPPGGH 775
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.8
Identities = 26/109 (23%), Positives = 30/109 (27%)
Frame = +2
Query: 572 GPVAGPXAPKXRPPDXHHHXTXPPSXVXXXXXXXXXXXXPPQXXXHXPXXXPPNXPPLPX 751
GP G P P ++ PP PPQ P PP P
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPG----QPYGPPGGYPPQQQRPPYQAQPYPGPPPPQ 727
Query: 752 XPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPH 898
P P P Q P+ PP G+ P Q P H
Sbjct: 728 QQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQ-YQPQQQQGGPMGPPGGH 775
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +2
Query: 725 PPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPP 895
PP+ PP PGP P P + + PP G P PPP
Sbjct: 56 PPSLPPSTMPPGPHGMPF--MGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPP 110
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPPLPXXPGPPXRPXXPSXXXP 799
PPQ P PP P PGPP +P P P
Sbjct: 122 PPQQPCE-PTTPPPCQPCPQGPPGPPGQPGIPGDNGP 157
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 713 PXXXPPNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSP 832
P P+ PP P P RP PS+ PH+ P
Sbjct: 87 PGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSPHSDAPEP 126
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 689 PPQXXXHXPXXXPPNXPPLPXXPGPPXRPXXP 784
PP + PP PP P GPP P P
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/63 (23%), Positives = 21/63 (33%)
Frame = +2
Query: 728 PNXPPLPXXPGPPXRPXXPSXXXPSQYPHTXXVSPPXGEXXXPXQNXXXRXXKPPPHXPR 907
P+ P P P +P PS P+Q + P P + + P P P
Sbjct: 553 PSSPVYGPTPSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSPN 612
Query: 908 XRP 916
P
Sbjct: 613 AIP 615
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.138 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,933,447
Number of Sequences: 27780
Number of extensions: 148812
Number of successful extensions: 1034
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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