Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O07
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0919 - 22627147-22627326,22627646-22627726,22627827-226281...    29   5.2  
01_05_0083 - 17987239-17987317,17988412-17988530,17989195-179893...    29   6.8  
08_02_0920 - 22633777-22633791,22635103-22635399,22635491-226356...    28   9.0  

>08_02_0919 -
           22627147-22627326,22627646-22627726,22627827-22628103,
           22629451-22629755,22629835-22629987,22630318-22631076
          Length = 584

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 180 VHGLLLSFRLCSMLSLYSCNLDAIVRSFSG*PNV 79
           ++  L SFR  + L LY C L  +   F+G PN+
Sbjct: 114 LNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNL 147


>01_05_0083 -
           17987239-17987317,17988412-17988530,17989195-17989304,
           17989422-17989617
          Length = 167

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 50  ICPLNFRSAFTFG*PLKDRTMASKL----QEYKDNIEQSLNDKSK 172
           + PL + SA +FG PL    +A +L    QE +  + Q+L DK+K
Sbjct: 51  LLPLGYVSAASFGSPLGTPVVAPELIKAMQEQQQQLSQALLDKAK 95


>08_02_0920 -
           22633777-22633791,22635103-22635399,22635491-22635646,
           22636118-22636203,22637969-22638791
          Length = 458

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 180 VHGLLLSFRLCSMLSLYSCNLDAIVRSFSG*PNV 79
           +H  + S R  + L L SC L A    FSG PN+
Sbjct: 138 LHAAIFSCRELTKLELGSCRLPAAPSDFSGFPNL 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,515,381
Number of Sequences: 37544
Number of extensions: 148454
Number of successful extensions: 341
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)