Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O07
         (915 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M74090-1|AAA66351.1|  197|Homo sapiens TB2 protein.                    43   0.001
M73547-1|AAA60136.1|  185|Homo sapiens polyposis locus-encoded p...    43   0.001
BC065926-1|AAH65926.1|  185|Homo sapiens REEP5 protein protein.        43   0.001
BC000232-1|AAH00232.2|  189|Homo sapiens REEP5 protein protein.        43   0.001
AY562243-1|AAT70688.1|  189|Homo sapiens receptor expression enh...    43   0.001
AK058112-1|BAB71670.1|  184|Homo sapiens protein ( Homo sapiens ...    38   0.067
BC008201-1|AAH08201.1|  184|Homo sapiens receptor accessory prot...    36   0.21 
AY562244-1|AAT70689.1|  184|Homo sapiens receptor expression enh...    36   0.21 

>M74090-1|AAA66351.1|  197|Homo sapiens TB2 protein.
          Length = 197

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +2

Query: 134 KDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           ++  ++ L++K+   T      E K GVNR +I LG++    LYLVFG+GA L
Sbjct: 14  RERFDRFLHEKNC-MTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASL 65


>M73547-1|AAA60136.1|  185|Homo sapiens polyposis locus-encoded
           protein protein.
          Length = 185

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +2

Query: 134 KDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           ++  ++ L++K+   T      E K GVNR +I LG++    LYLVFG+GA L
Sbjct: 2   RERFDRFLHEKNC-MTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASL 53


>BC065926-1|AAH65926.1|  185|Homo sapiens REEP5 protein protein.
          Length = 185

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +2

Query: 134 KDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           ++  ++ L++K+   T      E K GVNR +I LG++    LYLVFG+GA L
Sbjct: 2   RERFDRFLHEKNC-MTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASL 53


>BC000232-1|AAH00232.2|  189|Homo sapiens REEP5 protein protein.
          Length = 189

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +2

Query: 134 KDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           ++  ++ L++K+   T      E K GVNR +I LG++    LYLVFG+GA L
Sbjct: 6   RERFDRFLHEKNC-MTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASL 57


>AY562243-1|AAT70688.1|  189|Homo sapiens receptor expression
           enhancing protein 5 protein.
          Length = 189

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +2

Query: 134 KDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           ++  ++ L++K+   T      E K GVNR +I LG++    LYLVFG+GA L
Sbjct: 6   RERFDRFLHEKNC-MTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASL 57


>AK058112-1|BAB71670.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25383 fis, clone TST02290, highly similar to Mus
           musculus Dp1l1 mRNA for polyposis locus protein 1-like 1
           (TB2 ).
          Length = 184

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 179 TKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           T+     E K GV + Y+  G VA   LYL+FG+GA L
Sbjct: 19  TEVLGALEAKTGVEKRYLAAGAVALLSLYLLFGYGASL 56


>BC008201-1|AAH08201.1|  184|Homo sapiens receptor accessory protein
           6 protein.
          Length = 184

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 179 TKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           T+     E K GV + Y+  G V    LYL+FG+GA L
Sbjct: 19  TEVLGALEAKTGVEKRYLAAGAVTLLSLYLLFGYGASL 56


>AY562244-1|AAT70689.1|  184|Homo sapiens receptor expression
           enhancing protein 6 protein.
          Length = 184

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 179 TKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAEL 292
           T+     E K GV + Y+  G V    LYL+FG+GA L
Sbjct: 19  TEVLGALEAKTGVEKRYLAAGAVTLLSLYLLFGYGASL 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,892,594
Number of Sequences: 237096
Number of extensions: 878358
Number of successful extensions: 1720
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)