Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O04
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773...    32   0.71 

>06_03_0095 - 16575938-16576585,16577028-16577219,16577294-16577392,
            16577496-16577618,16577717-16577929,16578143-16578251,
            16578339-16578427,16578604-16578880,16578974-16579084,
            16579160-16580508,16581218-16581631
          Length = 1207

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 163  IFVLTMISFNFNCAMYISVNKFACLQHI*LW 71
            + + T + +  NC M +SVN F  +QHI +W
Sbjct: 1052 VLMYTCVVWVVNCQMALSVNYFTIIQHIFIW 1082


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,729,221
Number of Sequences: 37544
Number of extensions: 251548
Number of successful extensions: 288
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)