Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O02
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0072 - 31469595-31469684,31469762-31469848,31469968-314700...    33   0.40 
05_05_0127 - 22580720-22580808,22580936-22580987,22581703-225819...    31   0.93 
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423...    31   0.93 
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24...    29   4.9  
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644...    28   8.6  

>03_06_0072 -
           31469595-31469684,31469762-31469848,31469968-31470036,
           31470117-31470185,31470269-31471306
          Length = 450

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -1

Query: 221 LQTGRDLTFCALRSATISSVRNSTSSLSPFV*SAFNPQ---PQLQVLEWL-CSKLVEARV 54
           L  G  + F +   +    V  S+ S SP + SAFNP    P LQ  +WL CS L+ +  
Sbjct: 118 LAIGLLMVFTSGMGSATGRVGASSLSASPSISSAFNPAALLPFLQATKWLPCSDLITSAA 177

Query: 53  P 51
           P
Sbjct: 178 P 178


>05_05_0127 -
           22580720-22580808,22580936-22580987,22581703-22581908,
           22582019-22582152,22582239-22582369,22583333-22583392,
           22583615-22583755,22583880-22584347,22584524-22584686,
           22585373-22585476,22585755-22585853,22586177-22586281,
           22586516-22586596,22587168-22587986,22588497-22588553
          Length = 902

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 270 FVKTTSAPSPFTVKPSTSDRERLDLLCFAFSNYFF-CQELYQFSFTFRVKRLQ 115
           +++ TSAP P TV+P     + L ++  +  NY + C +L        V+R+Q
Sbjct: 621 YLRLTSAPDPATVRPEHVLEKALSMVETSQKNYLYKCDQLKSIRQDLTVQRIQ 673


>01_06_1263 +
           35840502-35841308,35841763-35841969,35842272-35842370,
           35843361-35843464,35844521-35844698,35844774-35845244,
           35845383-35845523,35846290-35846349,35846427-35846490,
           35847295-35847524,35847606-35847704
          Length = 819

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 270 FVKTTSAPSPFTVKPSTSDRERLDLLCFAFSNYFF-CQELYQFSFTFRVKRLQ 115
           +++ TSAP P TV+P     + L ++  +  NY + C +L        V+R+Q
Sbjct: 611 YLRLTSAPDPATVRPEDVLEKALHMVETSQKNYLYKCDQLKSIRQDLTVQRIQ 663


>08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796,
            246893-247240,247882-248721,248786-248832,249470-249596,
            249672-249836,249973-251370,251453-251713,251802-252161
          Length = 1539

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 323  DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQDPPAA 469
            D D +    Q E    ++ +  P FE+  V+GD  +    S  Q+P  A
Sbjct: 1004 DEDSYTAPCQLEVDSMAQTKEVPSFEISEVQGDGIVVHPISLDQEPSNA 1052


>01_06_0959 -
           33362810-33363125,33363309-33363475,33363583-33364410,
           33364483-33364719,33365455-33365871,33365951-33366412,
           33367197-33367382
          Length = 870

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 551 LHTLCHSIHPYIGLFRQCRTHRYIHQQKLQ 462
           LH + H  HP +  F   R H Y+H  K +
Sbjct: 167 LHNIGHENHPTVLRFYSLRVHDYVHTIKFR 196


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,500,668
Number of Sequences: 37544
Number of extensions: 402758
Number of successful extensions: 1041
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)