Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_O02
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein. 64 9e-10
M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA ... 64 9e-10
L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein. 64 9e-10
DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1,... 64 9e-10
BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1,... 64 9e-10
BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1,... 64 9e-10
BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1,... 64 9e-10
BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1,... 64 9e-10
AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein. 64 9e-10
AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding prot... 64 9e-10
BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 32 2.4
BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 32 2.4
AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens ... 32 2.4
AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptid... 32 2.4
AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein. 32 2.4
AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein. 32 3.2
U44378-1|AAA91041.1| 552|Homo sapiens Dpc4 protein. 31 4.2
BC002379-1|AAH02379.1| 552|Homo sapiens SMAD family member 4 pr... 31 4.2
AF045447-1|AAC03051.1| 552|Homo sapiens deleted in pancreatic c... 31 4.2
AB043547-1|BAB40977.1| 436|Homo sapiens SMAD4 protein. 31 4.2
M17754-1|AAA51838.1| 395|Homo sapiens BN51T protein. 31 7.4
CR541803-1|CAG46602.1| 398|Homo sapiens POLR3D protein. 31 7.4
CR536509-1|CAG38747.1| 398|Homo sapiens POLR3D protein. 31 7.4
BC004484-1|AAH04484.1| 398|Homo sapiens polymerase (RNA) III (D... 31 7.4
BC002603-1|AAH02603.1| 398|Homo sapiens polymerase (RNA) III (D... 31 7.4
AY092086-1|AAM18216.1| 398|Homo sapiens RNA polymerase III 53 k... 31 7.4
>X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA
splicing factor SF2p32, complete sequence. ).
Length = 278
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 104 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 163
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 164 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 223
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 224 TDSLDWALYDHLMDFLADRGVDNTFADEL 252
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 61 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 99
>L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein.
Length = 282
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 108 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 167
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 168 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 227
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 228 TDSLDWALYDHLMDFLADRGVDNTFADEL 256
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 97 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLP 213
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLP 103
>AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding protein
precursor protein.
Length = 197
Score = 63.7 bits (148), Expect = 9e-10
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQ 394
G+ ++ +G E L +++ E I VTFN+N+ T D ++ Q +++ E+ S P
Sbjct: 23 GWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPN 82
Query: 395 FEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFGIDEITLY---KGEWNDKVYAVA 556
F V++++ D L C Y +D + +D+F I E++ + EW D Y +
Sbjct: 83 FVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLN 142
Query: 557 XXXXXXXXXXXXMNLLEEKGISNEFVQKL 643
M+ L ++G+ N F +L
Sbjct: 143 TDSLDWALYDHLMDFLADRGVDNTFADEL 171
>BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 167 KK*LLNAKHRRSSLSLSEVEGFTVKGDGAEVVLTKQLKDE-TIRVTFNVNHTVDSDDFEG 343
KK +L + R SLSL +EG G GA+ V+ +++ + +IR+ N+ V +
Sbjct: 301 KKDILMHRWRYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359
Query: 344 DVQTEKQEFSEMRSKPQFEVDLVRG 418
+ T+K F+E+RS +F+V + G
Sbjct: 360 YL-TKK--FAELRSPNEFKVYMGHG 381
>BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 167 KK*LLNAKHRRSSLSLSEVEGFTVKGDGAEVVLTKQLKDE-TIRVTFNVNHTVDSDDFEG 343
KK +L + R SLSL +EG G GA+ V+ +++ + +IR+ N+ V +
Sbjct: 301 KKDILMHRWRYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359
Query: 344 DVQTEKQEFSEMRSKPQFEVDLVRG 418
+ T+K F+E+RS +F+V + G
Sbjct: 360 YL-TKK--FAELRSPNEFKVYMGHG 381
>AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ10830 fis, clone NT2RP4001143, weakly similar to
SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE (EC 3.5.1.18). ).
Length = 475
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 167 KK*LLNAKHRRSSLSLSEVEGFTVKGDGAEVVLTKQLKDE-TIRVTFNVNHTVDSDDFEG 343
KK +L + R SLSL +EG G GA+ V+ +++ + +IR+ N+ V +
Sbjct: 301 KKDILMHRWRYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359
Query: 344 DVQTEKQEFSEMRSKPQFEVDLVRG 418
+ T+K F+E+RS +F+V + G
Sbjct: 360 YL-TKK--FAELRSPNEFKVYMGHG 381
>AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens
cDNA FLJ10400 fis, clone NT2RM4000395. ).
Length = 311
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 167 KK*LLNAKHRRSSLSLSEVEGFTVKGDGAEVVLTKQLKDE-TIRVTFNVNHTVDSDDFEG 343
KK +L + R SLSL +EG G GA+ V+ +++ + +IR+ N+ V +
Sbjct: 137 KKDILMHRWRYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 195
Query: 344 DVQTEKQEFSEMRSKPQFEVDLVRG 418
+ T+K F+E+RS +F+V + G
Sbjct: 196 YL-TKK--FAELRSPNEFKVYMGHG 217
>AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptidase
protein.
Length = 475
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 167 KK*LLNAKHRRSSLSLSEVEGFTVKGDGAEVVLTKQLKDE-TIRVTFNVNHTVDSDDFEG 343
KK +L + R SLSL +EG G GA+ V+ +++ + +IR+ N+ V +
Sbjct: 301 KKDILMHRWRYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359
Query: 344 DVQTEKQEFSEMRSKPQFEVDLVRG 418
+ T+K F+E+RS +F+V + G
Sbjct: 360 YL-TKK--FAELRSPNEFKVYMGHG 381
>AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein.
Length = 391
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 167 KK*LLNAKHRRSSLSLSEVEGFTVKGDGAEVVLTKQLKDE-TIRVTFNVNHTVDSDDFEG 343
KK +L + R SLSL +EG G GA+ V+ +++ + +IR+ N+ V +
Sbjct: 217 KKDILMHRWRYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 275
Query: 344 DVQTEKQEFSEMRSKPQFEVDLVRG 418
+ T+K F+E+RS +F+V + G
Sbjct: 276 YL-TKK--FAELRSPNEFKVYMGHG 297
>AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein.
Length = 1111
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 311 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVD 406
N+ DSD+ E ++TE EFSE S+ ++ D
Sbjct: 212 NYNYDSDEDEEQMETEDSEFSEQESEDEYSDD 243
>U44378-1|AAA91041.1| 552|Homo sapiens Dpc4 protein.
Length = 552
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 649 LQXPPTSTRRTSIFWSPYLNSPSENNVTSN*NLNSI 756
+Q PP++ T + +P L +PSE+N TS N +I
Sbjct: 182 IQHPPSNRASTETYSTPALLAPSESNATSTANFPNI 217
>BC002379-1|AAH02379.1| 552|Homo sapiens SMAD family member 4
protein.
Length = 552
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 649 LQXPPTSTRRTSIFWSPYLNSPSENNVTSN*NLNSI 756
+Q PP++ T + +P L +PSE+N TS N +I
Sbjct: 182 IQHPPSNRASTETYSTPALLAPSESNATSTANFPNI 217
>AF045447-1|AAC03051.1| 552|Homo sapiens deleted in pancreatic
carcinoma protein.
Length = 552
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 649 LQXPPTSTRRTSIFWSPYLNSPSENNVTSN*NLNSI 756
+Q PP++ T + +P L +PSE+N TS N +I
Sbjct: 182 IQHPPSNRASTETYSTPALLAPSESNATSTANFPNI 217
>AB043547-1|BAB40977.1| 436|Homo sapiens SMAD4 protein.
Length = 436
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 649 LQXPPTSTRRTSIFWSPYLNSPSENNVTSN*NLNSI 756
+Q PP++ T + +P L +PSE+N TS N +I
Sbjct: 182 IQHPPSNRASTETYSTPALLAPSESNATSTANFPNI 217
>M17754-1|AAA51838.1| 395|Homo sapiens BN51T protein.
Length = 395
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 236 VKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVR 415
V+G+ +VVL KQ KD ++ N D EG V + + Q + V
Sbjct: 288 VQGEDGQVVLIKQEKDREAKLAENACTLADLT--EGQVG---KLLIRKSGRVQLLLGKVT 342
Query: 416 GDTTLGFTCSYLQD 457
D T+G CS+LQ+
Sbjct: 343 LDVTMGTACSFLQE 356
>CR541803-1|CAG46602.1| 398|Homo sapiens POLR3D protein.
Length = 398
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 236 VKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVR 415
V+G+ +VVL KQ KD ++ N D EG V + + Q + V
Sbjct: 291 VQGEDGQVVLIKQEKDREAKLAENACTLADLT--EGQVG---KLLIRKSGRVQLLLGKVT 345
Query: 416 GDTTLGFTCSYLQD 457
D T+G CS+LQ+
Sbjct: 346 LDVTMGTACSFLQE 359
>CR536509-1|CAG38747.1| 398|Homo sapiens POLR3D protein.
Length = 398
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 236 VKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVR 415
V+G+ +VVL KQ KD ++ N D EG V + + Q + V
Sbjct: 291 VQGEDGQVVLIKQEKDREAKLAENACTLADLT--EGQVG---KLLIRKSGRVQLLLGKVT 345
Query: 416 GDTTLGFTCSYLQD 457
D T+G CS+LQ+
Sbjct: 346 LDVTMGTACSFLQE 359
>BC004484-1|AAH04484.1| 398|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide D, 44kDa protein.
Length = 398
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 236 VKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVR 415
V+G+ +VVL KQ KD ++ N D EG V + + Q + V
Sbjct: 291 VQGEDGQVVLIKQEKDREAKLAENACTLADLT--EGQVG---KLLIRKSGRVQLLLGKVT 345
Query: 416 GDTTLGFTCSYLQD 457
D T+G CS+LQ+
Sbjct: 346 LDVTMGTACSFLQE 359
>BC002603-1|AAH02603.1| 398|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide D, 44kDa protein.
Length = 398
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 236 VKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVR 415
V+G+ +VVL KQ KD ++ N D EG V + + Q + V
Sbjct: 291 VQGEDGQVVLIKQEKDREAKLAENACTLADLT--EGQVG---KLLIRKSGRVQLLLGKVT 345
Query: 416 GDTTLGFTCSYLQD 457
D T+G CS+LQ+
Sbjct: 346 LDVTMGTACSFLQE 359
>AY092086-1|AAM18216.1| 398|Homo sapiens RNA polymerase III 53 kDa
subunit RPC4 protein.
Length = 398
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 236 VKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVR 415
V+G+ +VVL KQ KD ++ N D EG V + + Q + V
Sbjct: 291 VQGEDGQVVLIKQEKDREAKLAENACTLADLT--EGQVG---KLLIRKSGRVQLLLGKVT 345
Query: 416 GDTTLGFTCSYLQD 457
D T+G CS+LQ+
Sbjct: 346 LDVTMGTACSFLQE 359
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,462,131
Number of Sequences: 237096
Number of extensions: 2303796
Number of successful extensions: 6575
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6565
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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