Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_O02
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical pr...    49   5e-06
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AL032651-2|CAB60579.1|  272|Caenorhabditis elegans Hypothetical ...    29   5.9  
U97009-2|AAC69029.3|  342|Caenorhabditis elegans Serpentine rece...    28   7.8  

>Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical
           protein F59A2.3 protein.
          Length = 236

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +2

Query: 227 GFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMR-SKPQFEV 403
           GF V    AEV LTK+   E I V FNVNH+VD D  EG      Q  + +  + P F V
Sbjct: 71  GFQVTNKDAEVRLTKKNGSEDILVVFNVNHSVDMD--EGFDDEPSQAVAPVPVAMPPFTV 128

Query: 404 DLVRGDTTLGFTCSYLQDPPAASADEYNDVFGIDE 508
           ++ +GD  L F    +  P     DEY+  F ++E
Sbjct: 129 EITKGDQRLCFHLELV--PVDDQPDEYD--FRVEE 159



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 600 Y*KKRA*AMNSCRSCQTSXTAYEHTAYINLLESISKF 710
           Y ++R      C++     T YEH+ Y+ LL+ I KF
Sbjct: 197 YLEERGLDARFCKTLVAYATHYEHSQYVGLLDKIKKF 233


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 22/62 (35%), Positives = 32/62 (51%)
 Frame = +2

Query: 197 RSSLSLSEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSE 376
           RSS+S SE E   ++     V LTK+L  E    T N + + D DD E   +TE+    +
Sbjct: 553 RSSMSDSEKEKAEIENRKRRVKLTKKLIKEKRGQTSN-DRSSDEDDGEQQWKTEQARRVK 611

Query: 377 MR 382
           M+
Sbjct: 612 MQ 613


>AL032651-2|CAB60579.1|  272|Caenorhabditis elegans Hypothetical
           protein Y6D1A.2 protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
 Frame = +2

Query: 179 LNAKHRRSSLSLSEVEGFTVKGDGAEVVLTKQLKDETIR-VTFNVNHTVDSDDFEGDVQT 355
           L A H+    +L+ +E   V+    E  +  Q   E++R ++ NV H VD+D F+ +++ 
Sbjct: 38  LKAAHKMQVDALN-IELTAVQNVLKEKSIINQSLTESLRNISANVRHRVDADSFKIELKR 96

Query: 356 EKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQDPPAASADEYNDVFGIDE 508
           E  E   +R +   +   V+      F  SY         +  N +  +DE
Sbjct: 97  EAMEKFHIRVELLAQCAKVKELERDKFQLSYQMQELRTIGEHQNLIKMVDE 147


>U97009-2|AAC69029.3|  342|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 33 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 583 RSTHEPTRRKGHKQ*IRAEAVRLQXPPTSTRRTSIFW 693
           RS H P+ R   ++ +RA  ++   P  S    SIFW
Sbjct: 238 RSVHSPSTRDNARRLVRALTIQSIIPLVSVFPASIFW 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,673,720
Number of Sequences: 27780
Number of extensions: 357085
Number of successful extensions: 1057
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)