Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_N24
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 35 0.091
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z48585-3|CAA88485.1| 322|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z66512-4|CAA91326.1| 329|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 28 7.9
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 28 7.9
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 34.7 bits (76), Expect = 0.091
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +2
Query: 212 DNASNVLKGSNNESDSKAESRDELKPRSPXXIEDGLSRIETIDFGSTAGVVKEYNGEAVV 391
D+ + K S ESD +++ D+ KP+SP ED IE +D + + + + +
Sbjct: 244 DSPAGPKKYSKFESDPESD-HDDTKPKSPGKAEDDDDVIEVLDDALHSDDDADSDEDKYL 302
Query: 392 ENPTDRLTEDINGKENELEPKS 457
+ P DR E++ E L ++
Sbjct: 303 KTPEDREWEEMTETEQRLHKEA 324
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical protein
K02B9.2 protein.
Length = 819
Score = 32.3 bits (70), Expect = 0.49
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = +2
Query: 116 FALTVHAAVID--RGLQTQSNINREVNMTKPIIDDNA-SNVLKGSNNESDSKAESRDELK 286
F++T+ A + D R + +N + II+ NA S L SN + A+ +++
Sbjct: 695 FSITLKAMLYDYWRTMVQMQYRGANINFLQSIINLNARSAALNSSNARASGSADVQNQTV 754
Query: 287 PRSPXXIEDGLSRIETIDFGSTAGVVKEYNGEAVVENPTDRLTEDINGKENELEPKSNHD 466
+ +D + + + ++ GEA N D +D+N ++ PKS++
Sbjct: 755 SATVEGADDASANVNALSDLLAQSFPRQAEGEASRRNDIDHPEDDLNQADS---PKSDNQ 811
Query: 467 FFEGP 481
+ P
Sbjct: 812 SDKDP 816
>Z48585-3|CAA88485.1| 322|Caenorhabditis elegans Hypothetical
protein ZK673.3 protein.
Length = 322
Score = 32.3 bits (70), Expect = 0.49
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Frame = +2
Query: 305 IEDGLSRIETIDFGSTAGVVKEYNGEAVVENPTDRLTEDINGKEN----ELEPKSNHDFF 472
I+D E+ F + N E +E+P + E EN +LEP H+
Sbjct: 191 IDDDKKDKESSHFDECFEEMDSENVEIKMESPQEEAAEKSKFSENLVEVKLEPIETHELD 250
Query: 473 EGPSIFPIIDCPENCTELDFNEFIFNEDIQSKYKDEYYDDAND 601
+ S F D ++ +L N F + KY ++ D+A+D
Sbjct: 251 KTISDFSSSDIIDSSQKLQQNGFPEKVEQMDKYSNKLKDEASD 293
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical
protein C27H6.3 protein.
Length = 660
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 416 EDINGKENELEPKSNHDFFEGPSIFPIIDCPENCTELDFNEFIFNEDIQSKYKDEYYDDA 595
ED +G +E+E N D FE F D EN EL+ +E + +E++ ++E +
Sbjct: 18 EDFSGFLSEIEENENEDEFENDDEFEDDDELENVDELEDDE-LSSEEVDIPSENEVIVEL 76
Query: 596 ND 601
+D
Sbjct: 77 HD 78
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/105 (20%), Positives = 46/105 (43%)
Frame = +2
Query: 152 GLQTQSNINREVNMTKPIIDDNASNVLKGSNNESDSKAESRDELKPRSPXXIEDGLSRIE 331
G Q+Q N + ++ + + + DS+ +S PR+ ++DG+S +
Sbjct: 956 GAQSQKQSNDQASLRRGLFKKKNEKSGGTTTGNDDSEGDSSPST-PRTVSSMDDGVSPLA 1014
Query: 332 TIDFGSTAGVVKEYNGEAVVENPTDRLTEDINGKENELEPKSNHD 466
+ + K + ++++ + E+I+ ENE E SN +
Sbjct: 1015 STSYYKKKSAPKLHFAFGLLKSVKPDMDEEISDNENE-EGTSNEE 1058
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/105 (20%), Positives = 46/105 (43%)
Frame = +2
Query: 152 GLQTQSNINREVNMTKPIIDDNASNVLKGSNNESDSKAESRDELKPRSPXXIEDGLSRIE 331
G Q+Q N + ++ + + + DS+ +S PR+ ++DG+S +
Sbjct: 956 GAQSQKQSNDQASLRRGLFKKKNEKSGGTTTGNDDSEGDSSPST-PRTVSSMDDGVSPLA 1014
Query: 332 TIDFGSTAGVVKEYNGEAVVENPTDRLTEDINGKENELEPKSNHD 466
+ + K + ++++ + E+I+ ENE E SN +
Sbjct: 1015 STSYYKKKSAPKLHFAFGLLKSVKPDMDEEISDNENE-EGTSNEE 1058
>Z66512-4|CAA91326.1| 329|Caenorhabditis elegans Hypothetical
protein F52H3.6 protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +2
Query: 362 VKEYNGEAVVENPTDRLTEDINGKENELEPKSNHDFFEGPSIFPIIDCPENCTELDFNEF 541
V + G VV++ T+++ D+ + +++ + ++FF + I P+ C E D N
Sbjct: 219 VSQIFGADVVKDFTEKMNIDLIARGHQVV-QDGYEFFADKRLVTIFSAPKYCGEFDNNAA 277
Query: 542 IFNED 556
+ D
Sbjct: 278 VMIVD 282
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 353 AGVVKEYNGEAVVENPTDRLTEDINGKENEL-EPKSNHDFF 472
A +V+ Y G+ E PT RL ED+ EL P N D F
Sbjct: 237 AKMVRNYEGKP--EEPTQRLLEDVRNDLEELNRPGHNADTF 275
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 353 AGVVKEYNGEAVVENPTDRLTEDINGKENEL-EPKSNHDFF 472
A +V+ Y G+ E PT RL ED+ EL P N D F
Sbjct: 237 AKMVRNYEGKP--EEPTQRLLEDVRNDLEELNRPGHNADTF 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,082,467
Number of Sequences: 27780
Number of extensions: 319300
Number of successful extensions: 1161
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -