Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_N23
(937 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 2e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.005
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.006
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 34 0.025
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.033
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.31
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.54
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 30 0.54
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.94
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 2.2
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 27 2.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 505 PPXPXLIXXPXPSXPPAPXQPPXXXP--PXPPXXPFSFFPXXPXPPPPXPXXI 353
PP P + P P+ P P PP P PP P P PPPP P +
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = -1
Query: 532 PXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPPXP 362
P PP P P P P PPAP PP PP P P PPPP P
Sbjct: 732 PPPPPPAVIVPTPA--PAPIPVPPPAPIM---GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 490 LIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPP 368
L+ P PPA P P P P P PPPP
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 550 PPFFGXPXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXP 407
PP P P P P I P PP P PP PP P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.1 bits (82), Expect = 0.004
Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = -1
Query: 532 PXFPPXXXF--PPXPXLIXXPXPSXPPAPXQP--PXXXPPXPPXXPFSFFPXXPXPPPP 368
P PP PP P P PS P P QP P PP P P + P P PPP
Sbjct: 147 PSIPPPSPASAPPIPSKAP-PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 34.3 bits (75), Expect = 0.025
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 523 PPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPP 368
PP PP P P S PP P PP P P P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP-PSPASAPPIPSKAPPIPSSLPPP 174
Score = 33.1 bits (72), Expect = 0.058
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = -1
Query: 523 PPXXXFPPXPXLIXXPXPSX-PPAPXQ-PPXXXPPXPPXXPFSFFPXXPXPPPPXPXXI 353
PP PP P PS PP P PP P P P S P P PP P +
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA-PSLPSAVPPMPPKV 201
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -1
Query: 478 PXPSXPPAPXQPPXXXPPXPPXXPFS--FFPXXPXPPPPXP 362
P P P + +PP PP P P S P P PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Frame = -1
Query: 559 SLXPPFFGXPXFPPXXXFPPXPXLIXXPXPSXP---PAPXQP-PXXXPPXPPXXPFSFFP 392
S PP P P PP P PS P PA P P PP P P P
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSA---PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Query: 391 XXPXPPPP 368
P PP
Sbjct: 178 AAPVKSPP 185
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.7 bits (81), Expect = 0.005
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = -1
Query: 505 PPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXP 377
PP P + P PS PP P PP PP P S P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPP---SAPPPPLPASSAPSVPNP 1746
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -1
Query: 523 PPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPPXP 362
PP P + P P PP PP PP P P + PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSA-------PPPPLP 1736
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 505 PPXPXLIXX-PXPSXPPAPXQPPXXXPPXPPXXPF-SFFPXXPXPPP 371
P P ++ P PS PAP P PP P P S P PP
Sbjct: 1460 PKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPP 1506
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 531 PXSPXXLXFPLXXX*SPXPXPPXPXPPXSPPXPXPLXPXFXPFPFFXXXXPPXPP 367
P P P +P P P PP S P P P P P P P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP-PMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 418 GXKGXGXXGAXGGXGXGRGGXGXLGXGKGEXKXXGGXGVXQKRGXKGXKKNXXKXAKXG 594
G +G G G+ GG G GG G G G+G + G G RG +G + + G
Sbjct: 6 GSRG-GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 442 GAXGGXGXGRGGXGXLGXGKGEXKXXGGXGVXQKRGXKGXKKNXXKXAKXGXKXKXGXGA 621
G+ GG G RGG G G+G GG G + G G + + + G + G +
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRG--GFGGGRGGARGGGRGGAR--GGRGGRGGARGGRGGSS 61
Query: 622 G 624
G
Sbjct: 62 G 62
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 418 GXKGXGXXGAXGGXGXGRGGXGXLGXGKGEXKXXGGXGVXQKRGXKGXKK 567
G +G G G G GRGG G+G + G + G KG K
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 24/65 (36%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = -1
Query: 547 PFFGXPXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXP--- 377
P G P PP PP P P PP P PP PP P P + P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVP----KPSVGVPPVP--PPSTAPPVP--TPSAGLPPVPVPTAK 1235
Query: 376 PPPXP 362
PP P
Sbjct: 1236 APPVP 1240
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -1
Query: 538 GXPXFP-PXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPP 371
G P P P PP P P PA PP P P P P PPP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 538 GXPXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPPXP 362
G P P PP P P P+ PP P P P P PP P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP---KPSVAAPPVPVP 1136
Score = 30.7 bits (66), Expect = 0.31
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Frame = -1
Query: 547 PFFGXPXFP-PXXXFPPXPXLIXXPXPSXPPAPXQP-PXXXPPXPPXXPFSFFPXXPXPP 374
P P P P PP P P PP+ P P PP P S P P P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Query: 373 ---PPXP 362
PP P
Sbjct: 1224 AGLPPVP 1230
Score = 29.5 bits (63), Expect = 0.71
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -1
Query: 547 PFFGXPXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPP 368
P G P PP PP P P PP P P PP P P S P P
Sbjct: 1203 PSVGVPPVPPPSTAPPVP----TPSAGLPPVPV-PTAKAPPVP--APSSEAPSVSTPRSS 1255
Query: 367 XP 362
P
Sbjct: 1256 VP 1257
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Frame = -1
Query: 547 PFFGXPXFPPXXXFPPXPX--LIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPP 374
P P P PP P + P P+ AP P P P S P P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 373 ---PPXP 362
PP P
Sbjct: 1186 AGVPPVP 1192
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -1
Query: 538 GXPXFP-PXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPPXP 362
G P P P PP P P P P+ PP P P P P PP P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAP-PVPKPSVAAPPVPAPSGAPPVP---KPSVAAPPVPAP 1174
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = -2
Query: 537 GXPXSPXXLXFP---LXXX*SPXPXPPXPXPPXSPPXPXPLXPXFXPFPFFXXXXPPXP 370
G P +P + P + +P PP P P PP P P P P PP P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA-PPVPKPSVAVPPVP 1115
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -1
Query: 547 PFFGXPXFP-PXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPP 371
P P P P PP P P P P+ PP P P P P PP
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVP---KPSVAAPPV 1152
Query: 370 PXP 362
P P
Sbjct: 1153 PAP 1155
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Frame = -1
Query: 547 PFFGXPXFPPXXXFPPXPX--LIXXPXPS----XPPAPXQPPXXXPPXPPXXPFSFFPXX 386
P P P PP P + P P+ PP P +P PP PP P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAPPVPKP 1203
Query: 385 PXPPPPXP 362
PP P
Sbjct: 1204 SVGVPPVP 1211
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 486 SPXPXPPXPXPP-XSPPXPXPLXPXFXPFPFFXXXXPPXPP 367
+P PP P P +PP P P P P PP PP
Sbjct: 1154 APSGAPPVPKPSVAAPPVPAP-SSGIPPVPKPAAGVPPVPP 1193
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -1
Query: 550 PPFFGXPXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPP 371
PP P P PP P P + PP P P PP P P + P P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVP-----PPSTAPPVP-TPSAGLPPVP--VPTAKAPPVPAPSS 1244
Query: 370 PXP 362
P
Sbjct: 1245 EAP 1247
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 9/62 (14%)
Frame = -1
Query: 520 PXXXFPPXPXL------IXXPXPSXPPAP---XQPPXXXPPXPPXXPFSFFPXXPXPPPP 368
P PP P L + P PP P PP P P P S P PPP
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKS-SSGAPSAPPP 1065
Query: 367 XP 362
P
Sbjct: 1066 VP 1067
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Frame = -1
Query: 538 GXPXFP-PXXXFPPXPX----LIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPP 374
G P P P PP P + P PS P +P PP P P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 373 PPXP 362
PP P
Sbjct: 1150 PPVP 1153
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 34.3 bits (75), Expect = 0.025
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Frame = -1
Query: 565 FXSLXPPFFGXPXF-----PPXXXFPPXPXLIXXPXPSXPPAPXQP--PXXXPPXPP 416
F S P FG P + P P P P P+ PP P P P PP PP
Sbjct: 130 FPSQVPNMFGPPLYHPAATAPSEFMPSIPGFGNLPNPAMPPIPFLPFNPAAQPPFPP 186
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -1
Query: 445 PPXXXPPXPPXXPFSFFPXXPXPPPPXPXXIK 350
PP PP PP P F P PPPP P +K
Sbjct: 5 PPGNPPPPPP--PPGFEPPSQPPPPPPPGYVK 34
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 478 PXPSXPPAPXQPPXXXPPXPP 416
P P PP +PP PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 483 PXPXPPXPXPPXSPPXPXP 427
P P PP PP PP P P
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 505 PPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPPXP 362
PP P P P PP P PP P S P PP P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 29.9 bits (64), Expect = 0.54
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -1
Query: 532 PXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXX--PPXPPXXPFSFFPXXPXPPPPXP 362
P PP P P P P AP PP P PP P + P P P P P
Sbjct: 429 PSLPPSAP-PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA--PAPPPAPAPAP 484
Score = 29.1 bits (62), Expect = 0.94
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 478 PXPSXPPAPXQPPXXXPPX-PPXXPFSFFPXXPXPPPPXP 362
P P+ P P P PP PP P P P PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGA-PAAPPLPPSAP 454
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 483 PXPXPPXPX-PPXSPPXPXPLXPXFXPFPFFXXXXPPXPP 367
P P P P +PP P P P P P PP PP
Sbjct: 433 PSAPPSLPMGAPAAPPLP-PSAPIAPPLPAGMPAAPPLPP 471
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -1
Query: 538 GXPXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXP 407
G P PP P + P+ PP P P PP P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP-APPPAPAPAP 484
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.9 bits (64), Expect = 0.54
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 497 PXPNXPXPPLPXPXPPXAPXXPXPFXP 417
P PN P P P P P P P P P
Sbjct: 108 PLPNEPVPEEPLPGEPPLPDEPVPEEP 134
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 497 PXPNXPXPPLPXPXPPXAPXXPXP 426
P P+ P P P P P P P P
Sbjct: 124 PLPDEPVPEEPLPGEPPLPNEPVP 147
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Frame = -1
Query: 556 LXPPFFGXPX--FPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXP 383
L P F P PP P P L P PP PP P P P P
Sbjct: 493 LPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIP 552
Query: 382 XPPPP 368
P
Sbjct: 553 GATAP 557
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -1
Query: 532 PXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXPPXPPXXPFSF 398
P PP PP + P P P P P PP P S+
Sbjct: 523 PMVPPGMALPPG---MPAPFPGYPAVPAMPGIPGATAPPGAPGSY 564
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.94
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 487 IXXPXPSXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPPXP 362
+ P S P + PP P P + P PPPP P
Sbjct: 153 VNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPP 194
Score = 29.1 bits (62), Expect = 0.94
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 463 PPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPP 368
PP QPP P P + P P PPPP
Sbjct: 167 PPPSFQPPSAAAPATSL-PSDYNPPPPPPPPP 197
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 483 PXPXPPXPXPPXSPP 439
P P PP P PP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 22.6 bits (46), Expect(2) = 5.9
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -1
Query: 478 PXPSXPPAPXQPPXXXPPXPPXXP 407
P + PA P PP PP P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
Score = 21.8 bits (44), Expect(2) = 5.9
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -1
Query: 430 PPXPPXXPFSFFPXXPXPPPPXP 362
P PP P PPPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPP 243
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 401 GKGXXXGXRGXGXGGLXGGXGXGGXGXGD*XXXRGKXXXXGEXGXPKKGGXKG 559
G+G G RG GG GG GG G G G G +GG +G
Sbjct: 139 GRGGFRGGRGGSRGGF-GGNSRGGFGGGSRGGFGGGSRGGSRGGF--RGGSRG 188
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -1
Query: 532 PXFPPXXXFPPXPXLIXXPX-PSXPPAPXQPPXXXPPXPPXXPFS-FFPXXPXPP 374
P P P P + P P P P P P PP P + P P PP
Sbjct: 539 PEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPP 593
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = -1
Query: 532 PXFPPXXXFPPXPXLIXXPXP-SXPPAPXQPPXXXPPXPPXXPFSFFPXXPXPPPPXP 362
P P P P P P + P P P PP P P + P PP P
Sbjct: 647 PSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPPLPP 704
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/56 (28%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = -1
Query: 565 FXSLXPPFFGXPXFPPXXXFPPXPXLIXXPXPSXPPAPXQPPXXXP---PXPPXXP 407
F P +F P FP P P P P +P P P PP P
Sbjct: 125 FIPTDPLYFDRASSKPVLQFPYSSVAALTPVPKKPSKPSKPRKKVPVSHPLPPTPP 180
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 419 GXRGXGXGGLXGGXGXGGXGXGD*XXXRGKXXXXGEXGXPKKG 547
G RG G GG G G GG G RG+ G P +G
Sbjct: 448 GSRG-GRGGFGGRGGFGGRGGF--GGGRGRGRGGARSGNPNRG 487
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,383,009
Number of Sequences: 5004
Number of extensions: 21571
Number of successful extensions: 336
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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