Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_N22
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 229 5e-61
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 148 9e-37
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 148 9e-37
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 145 8e-36
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 145 8e-36
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 86 5e-18
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 41 3e-04
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 3e-04
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 27 3.3
SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyce... 26 5.8
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 229 bits (559), Expect = 5e-61
Identities = 113/130 (86%), Positives = 118/130 (90%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 547
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 548 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYXIQKESTLHLV 727
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY IQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Query: 728 LRLXGGMQIF 757
LRL GGMQIF
Sbjct: 147 LRLRGGMQIF 156
Score = 229 bits (559), Expect = 5e-61
Identities = 113/130 (86%), Positives = 118/130 (90%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 547
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 548 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYXIQKESTLHLV 727
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY IQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Query: 728 LRLXGGMQIF 757
LRL GGMQIF
Sbjct: 223 LRLRGGMQIF 232
Score = 229 bits (559), Expect = 5e-61
Identities = 113/130 (86%), Positives = 118/130 (90%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 547
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 548 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYXIQKESTLHLV 727
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY IQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Query: 728 LRLXGGMQIF 757
LRL GGMQIF
Sbjct: 299 LRLRGGMQIF 308
Score = 221 bits (541), Expect = 8e-59
Identities = 109/127 (85%), Positives = 115/127 (90%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 547
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 548 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYXIQKESTLHLV 727
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY IQKESTLHLV
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Query: 728 LRLXGGM 748
LRL GG+
Sbjct: 375 LRLRGGL 381
Score = 153 bits (371), Expect = 3e-38
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 318
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 319 KTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
KTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 87 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 124
Score = 153 bits (371), Expect = 3e-38
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 318
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 319 KTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
KTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 200
Score = 153 bits (371), Expect = 3e-38
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 318
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 319 KTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
KTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 276
Score = 153 bits (371), Expect = 3e-38
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 318
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 319 KTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
KTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 352
Score = 153 bits (370), Expect = 4e-38
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = +2
Query: 518 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYX 697
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 698 IQKESTLHLVLRLXGGMQIF 757
IQKESTLHLVLRL GGMQIF
Sbjct: 61 IQKESTLHLVLRLRGGMQIF 80
Score = 84.6 bits (200), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 48 LRGGMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
LRGGMQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 124
Score = 84.6 bits (200), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 48 LRGGMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
LRGGMQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 200
Score = 84.6 bits (200), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 48 LRGGMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
LRGGMQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 276
Score = 84.6 bits (200), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 48 LRGGMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
LRGGMQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 352
Score = 81.8 bits (193), Expect = 1e-16
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 291
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 331 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 76.6 bits (180), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +1
Query: 289 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +3
Query: 60 MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
MQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 148 bits (359), Expect = 9e-37
Identities = 76/96 (79%), Positives = 81/96 (84%)
Frame = +2
Query: 518 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYX 697
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 698 IQKESTLHLVLRLXGGMQIFXENTYWXKPSHWKLKH 805
IQKESTLHLVLRL GG + + TY P K KH
Sbjct: 61 IQKESTLHLVLRLRGGGKKRKKKTY-TTPKKIKHKH 95
Score = 81.0 bits (191), Expect = 2e-16
Identities = 40/50 (80%), Positives = 41/50 (82%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 288
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 80.2 bits (189), Expect = 3e-16
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 517
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 76.6 bits (180), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +1
Query: 289 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +3
Query: 60 MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
MQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 148 bits (359), Expect = 9e-37
Identities = 76/96 (79%), Positives = 81/96 (84%)
Frame = +2
Query: 518 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYX 697
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 698 IQKESTLHLVLRLXGGMQIFXENTYWXKPSHWKLKH 805
IQKESTLHLVLRL GG + + TY P K KH
Sbjct: 61 IQKESTLHLVLRLRGGGKKRKKKTY-TTPKKIKHKH 95
Score = 81.0 bits (191), Expect = 2e-16
Identities = 40/50 (80%), Positives = 41/50 (82%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 288
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 80.2 bits (189), Expect = 3e-16
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 517
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 76.6 bits (180), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +1
Query: 289 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +3
Query: 60 MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
MQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 145 bits (351), Expect = 8e-36
Identities = 70/77 (90%), Positives = 74/77 (96%)
Frame = +2
Query: 518 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYX 697
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 698 IQKESTLHLVLRLXGGM 748
IQKESTLHLVLRL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 81.8 bits (193), Expect = 1e-16
Identities = 43/62 (69%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 315
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 316 GK 321
K
Sbjct: 87 SK 88
Score = 81.0 bits (191), Expect = 2e-16
Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 544
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 545 GK 550
K
Sbjct: 87 SK 88
Score = 76.6 bits (180), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +1
Query: 289 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +3
Query: 60 MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
MQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 145 bits (351), Expect = 8e-36
Identities = 70/77 (90%), Positives = 74/77 (96%)
Frame = +2
Query: 518 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYX 697
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG QLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 698 IQKESTLHLVLRLXGGM 748
IQKESTLHLVLRL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 81.8 bits (193), Expect = 1e-16
Identities = 43/62 (69%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 315
K K + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 316 GK 321
K
Sbjct: 87 SK 88
Score = 81.0 bits (191), Expect = 2e-16
Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 544
K + + K QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 545 GK 550
K
Sbjct: 87 SK 88
Score = 76.6 bits (180), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +1
Query: 289 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP + G+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +3
Query: 60 MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
MQIFVKTLTG TITLEVE+SDTI+NVK+KIQDKEGIPP + GK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 48
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 86.2 bits (204), Expect = 5e-18
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +2
Query: 518 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYX 697
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AG Q+ D + Y
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 698 IQKESTLHLVLRLXGG 745
++ S LHLVL L GG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 368 KQRFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 517
K+R K QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 27 KERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +1
Query: 289 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPXSAAVDLCGQ 432
M I VKTLTGK I L+++ +D + +K ++++KEGIPP + G+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGK 48
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +1
Query: 139 KPKFRTKREFLRXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 288
K + K QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 27 KERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 60 MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPXSAAIDLCGK 203
M I VKTLTG I L+++ +D + +K ++++KEGIPP + GK
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGK 48
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +2
Query: 518 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYX 697
+ + +K + + V++ ++ +K I I ++QRLI+AG L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 698 IQKESTLHLVLRL 736
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 35.5 bits (78), Expect = 0.010
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 172 RXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 279
+ +QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 41 KERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
Score = 35.5 bits (78), Expect = 0.010
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 401 RXQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 508
+ +QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 41 KERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 545 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDYXIQKESTL 718
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 131 FDGVRCFNFQCDGXTGKCFHKNLHSTS 51
FDG + +N CD GKCFHK +TS
Sbjct: 20 FDGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 586 NGVRCFNF*CDGFTGKCFHKDLHATS 509
+G + +N CD F GKCFHK ATS
Sbjct: 21 DGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 357 NGVRCFNF*CDGFTGKCFHKDLHATS 280
+G + +N CD F GKCFHK ATS
Sbjct: 21 DGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 629 EEFPLCPESLLSHSQWCQMLQL 564
EEF LC ESLL+H +QL
Sbjct: 345 EEFKLCKESLLAHKNSIYDVQL 366
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,142,700
Number of Sequences: 5004
Number of extensions: 60099
Number of successful extensions: 206
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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