Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_N14
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592...    30   2.9  
11_04_0170 + 14419523-14419843                                         29   3.8  
05_07_0222 - 28490262-28490792                                         29   6.6  
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924...    29   6.6  
05_04_0126 + 18252594-18256922                                         28   8.7  

>07_03_0044 -
           12758606-12758676,12758765-12758860,12759197-12759299,
           12759379-12759474,12759537-12759603,12759682-12759749,
           12759898-12759973,12760112-12760197,12760285-12760361,
           12761461-12761533,12761627-12761875,12761997-12762089,
           12762218-12762292,12762661-12762716,12763473-12763513,
           12763907-12764001,12764085-12764158,12765052-12765145,
           12765484-12765519
          Length = 541

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 530 RKMRTVHNILDVDKDGLISY 589
           RK+R++HN LD ++ GL+ Y
Sbjct: 11  RKLRSLHNALDCERSGLVRY 30


>11_04_0170 + 14419523-14419843
          Length = 106

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 581 SAHPCPRLRYCGRYASCGARTQTGPAPYTQCQNRNQ 474
           +A+P  R+ Y  RYAS    T++  A Y  C  R Q
Sbjct: 56  AAYPRRRILYDSRYASYNGLTESKAACYGSCPGRGQ 91


>05_07_0222 - 28490262-28490792
          Length = 176

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 559 RRGQGWADLVQRLLAVR*KVQVSWATSNAKQAKEFTD 669
           R G GW   ++RLL VR +V  +W +S A+      D
Sbjct: 46  RGGAGWGLRLRRLLRVRVRVARAWLSSPARLLARIRD 82


>04_04_0276 +
           24091360-24091464,24091580-24091713,24091813-24092454,
           24092858-24093044
          Length = 355

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 578 AHPCPRLRYCGR-YASCGARTQTGPAPYTQCQNRNQIPNRAVSFC 447
           A PC  LR   R YA+CGAR        T+C+   Q+     S C
Sbjct: 231 APPCRGLRLLMRHYATCGARKAAPGGGCTRCKRMVQLFRLHASVC 275


>05_04_0126 + 18252594-18256922
          Length = 1442

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 370 IAGDHRVASQLIKTLLQQTTWPTGNRQKETAR 465
           I  +H++A  +++ LL+ +  P GN  KE A+
Sbjct: 451 ILNNHKIALDIVRELLRWSQLPEGNSVKELAK 482


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,094,912
Number of Sequences: 37544
Number of extensions: 454265
Number of successful extensions: 1187
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)