Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_N06
(905 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0726 + 19758916-19759098,19759774-19760318,19760581-197614... 34 0.14
04_04_1477 + 33873976-33874080,33874433-33874544,33874777-338748... 31 0.95
12_02_1093 + 26023692-26023865,26023959-26024026,26024155-260241... 31 1.3
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 31 1.7
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 31 1.7
01_04_0064 - 15600467-15600528,15600606-15600647,15600732-156011... 30 2.9
12_02_1155 + 26541137-26541142,26541244-26542623,26542730-265428... 29 5.1
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 5.1
05_07_0250 + 28669593-28669660,28669759-28669817,28670144-286702... 29 5.1
08_02_1575 - 27961468-27961665,27962002-27962040,27963213-27963341 29 6.7
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 8.9
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 28 8.9
05_04_0075 - 17690097-17690378,17691079-17691216,17692195-176925... 28 8.9
02_05_0903 - 32630190-32630461,32631084-32631470,32631727-326318... 28 8.9
>09_04_0726 +
19758916-19759098,19759774-19760318,19760581-19761492,
19762067-19762328
Length = 633
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/132 (21%), Positives = 56/132 (42%)
Frame = +2
Query: 377 PQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENL 556
P + +PFD + +E+++E K + + +S +E+ VNKK N
Sbjct: 39 PPRVAARNPFDLLDE--EEEEEEEKEDEVYSEQPVSY---NEQKHSVNKKPG------NA 87
Query: 557 IRNRQEPSKHSLSIDNGGKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQI 736
+ + SK K V+ +RDE++ D+ + KP+ + ++ G +I
Sbjct: 88 VPETNKKSKKKKKKSKADKQVSTKSRDEKSLDSILEDLSIEKKPMQQRVNQNERASGKEI 147
Query: 737 SSTQTEPVLESV 772
+T P S+
Sbjct: 148 EIDETTPGTSSI 159
>04_04_1477 +
33873976-33874080,33874433-33874544,33874777-33874874,
33875548-33876261,33876348-33876518,33876955-33877011,
33877096-33878718
Length = 959
Score = 31.5 bits (68), Expect = 0.95
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Frame = +2
Query: 128 MGDGYHSPSGEPCAGLPTRTKKITRNGIFKTIKESVVRGSQQKITSPCVSETNPIGQPKV 307
MG G + G+P +PT K I+ + + S + + + +SE + K
Sbjct: 89 MGSGIFT--GQPRGSVPTINKAISDKSRWSFRRRST---RHRVLKNSDISEPETLSSSKA 143
Query: 308 MTEINP-NMPENPDLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLS 484
EI P N+ + S+KP L Q P D ++ ++ QD K+L
Sbjct: 144 KAEIAPSNIYSSTYSYASEKP------LQQEKP-DEKILQQEKSDEKILQQDEPAEKILQ 196
Query: 485 KRKGDEELMIVNK 523
+ K DE+++ +K
Sbjct: 197 QEKPDEKILQQDK 209
>12_02_1093 +
26023692-26023865,26023959-26024026,26024155-26024198,
26024287-26025035,26025506-26025595,26026174-26026235,
26026360-26026465
Length = 430
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 344 DLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNK 523
D +S+ N + + P + ++ KEKKQ+ KS+ + + R E I+NK
Sbjct: 116 DTKVSEAENKVAEPSAVEKPSENADVETKEKKQKKKSKKQENDEDVEARLEKAESAIINK 175
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 470 GKVLSKRKGDEELMIVNKKCKLSTELENLIRNRQEPSKHSL 592
G V+SK+K DEEL ++ K +T + N I R E +L
Sbjct: 506 GIVISKKKEDEELCLLKKALGQATRIVNRIHLRNEAKTATL 546
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 30.7 bits (66), Expect = 1.7
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +2
Query: 452 SQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLIRNRQEPSKHSLSIDNGGKSVNYCT 631
SQ S V+ KRK E I NK + ++ E K+ LS+D+G S
Sbjct: 541 SQSRSYIHVMLKRKTVEVAKIANKDVQTFKMAMTVMNKLLEDMKNQLSLDDGDNS-REAP 599
Query: 632 RDEENYKKQCT------DVDVVNKPIDNEFSLRKQNEGSQISSTQTEPV 760
+ +K + T + DV D+E+ + ++EG +++ P+
Sbjct: 600 KRAARHKSRSTVLTKDGNEDVGGGDEDSEYDVPSEDEGGNLTADILPPL 648
>01_04_0064 -
15600467-15600528,15600606-15600647,15600732-15601107,
15601186-15601447,15602992-15603158,15603344-15603484,
15603575-15603643
Length = 372
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/112 (19%), Positives = 50/112 (44%)
Frame = +2
Query: 323 PNMPENPDLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDE 502
PN E P + + + + ++ DRS ++ + +D+ G +R+ D
Sbjct: 262 PNGKEGPAVNLKSEKSESNVDRSRERERDRSRGRDRDSRGRDSDRDSKGRDSDRERERDR 321
Query: 503 ELMIVNKKCKLSTELENLIRNRQEPSKHSLSIDNGGKSVNYCTRDEENYKKQ 658
E ++ S + + ++ E S+H S D G ++ +RD++ +++Q
Sbjct: 322 EADRDRQRRHHSKDRSSGYSDK-EKSRHRSSRDRGDHYSSHSSRDKDRHRRQ 372
>12_02_1155 +
26541137-26541142,26541244-26542623,26542730-26542852,
26542996-26543168,26543332-26543572,26543931-26544023,
26544092-26544232,26544358-26544450,26544633-26544837,
26544993-26545078,26545532-26545620,26545736-26545820,
26545898-26545954,26546319-26546399,26547130-26547321
Length = 1014
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 176 PTRTKKITRNGIFKTIKESVVRGSQQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLI 355
PT+ K ITRN + + E V R I +S +G V E+ PE +++
Sbjct: 301 PTKKKAITRNKV--AVDEIVERIDAASIHPDGLSY---LGDSAVKLEVPSGFPEAQQIIV 355
Query: 356 SDKPNLI 376
KP +I
Sbjct: 356 DGKPRMI 362
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +2
Query: 524 KCKLSTELENLIRNRQEPSKHSLSIDNGGKSVNYCTRDEENYKKQCTDVDVVNKPIDNE 700
K K+ +++L ++Q + +DN +S+ +E+N +K ++++ +K D E
Sbjct: 1097 KTKIKDLVDSLNASKQNEEMLTTDVDNMRRSIEAARSNEDNLRKTLCELELKSKSSDYE 1155
>05_07_0250 +
28669593-28669660,28669759-28669817,28670144-28670248,
28670983-28671019,28671446-28671542,28671700-28671781,
28671870-28671939,28672049-28672212,28672897-28672940,
28673021-28673176,28673273-28673494,28673736-28673883,
28673947-28674034,28675032-28675159,28675259-28675323,
28675380-28675426,28675427-28675539,28676003-28676019
Length = 569
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 287 PIGQPKVMTEINPNMPENPDL-LISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDT 463
P G P+V + + P+ P D + + L++ + ++ ++++Q+ K Q
Sbjct: 187 PDGHPQVPSNLVPSPPRQEDSPQQQENHHAASSPLHEEAQQGGASVKNEQEQQKMKGQQP 246
Query: 464 SGGKVLSKRKGDEELMIVN 520
+ KR+ D+E+M+ N
Sbjct: 247 AKSSKRKKRRKDDEVMMDN 265
>08_02_1575 - 27961468-27961665,27962002-27962040,27963213-27963341
Length = 121
Score = 28.7 bits (61), Expect = 6.7
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Frame = +2
Query: 446 PKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLIRNRQEPSKHSLSID------NG 607
P+ +SGGKVL + K E + I KK + +LE L R P + S G
Sbjct: 20 PRRLLSSGGKVLGEEKAAENIYI--KKME-QEKLEKLARQGPSPGEQGSSTPAADVKAEG 76
Query: 608 GKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQISS 742
G + T +NY V V+ + L K + ++++
Sbjct: 77 GPTAGASTVKNKNYTLIAGAVGVLGASAIAWYRLSKPEKSEEVAN 121
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 323 PNMPENPDLLISDKPNLIPQHLNQHSP 403
PN+P+ P + S P ++ + L QH+P
Sbjct: 454 PNVPQQPSYVKSAAPTVVKRPLAQHTP 480
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 214 KYSIACYF-FCPCRQTSTRLT*W*VVTVAHGLQQC*GQIRAAAY 86
+ +I CYF F CR TS L+ + +TV GL+ G A Y
Sbjct: 104 RQTILCYFPFSECRVTSEALSRYYDITVGSGLKAVKGSRVAVHY 147
>05_04_0075 -
17690097-17690378,17691079-17691216,17692195-17692552,
17692720-17692805
Length = 287
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 302 KVMTEINPNMPENPDLLISDKPNLIPQHLNQHSP 403
+V+ + NP++P NP++ PN + Q L Q SP
Sbjct: 162 RVLEQTNPDIPGNPEIF---GPNFMAQKLYQLSP 192
>02_05_0903 -
32630190-32630461,32631084-32631470,32631727-32631817,
32632320-32632492,32632671-32632842
Length = 364
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +2
Query: 293 GQPKVMTEINPNMPENPDLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGG 472
G+ +M E+N +PE+ + D+ + Q P + A Q P +Q GG
Sbjct: 125 GEGGLMHELNIMIPESGSFVSGDEDDASGWEQEQRGPISAAAAAATSAVQVPAAQGGGGG 184
Query: 473 K 475
+
Sbjct: 185 E 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,345,558
Number of Sequences: 37544
Number of extensions: 450993
Number of successful extensions: 1150
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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