Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_N06
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein. 35 0.47
L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich prote... 35 0.47
L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion pr... 35 0.47
L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein. 35 0.47
BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member... 35 0.47
U28282-1|AAC99849.1| 359|Homo sapiens zinc finger protein protein. 31 5.7
U16296-1|AAA98443.1| 1591|Homo sapiens TIAM1 protein protein. 31 5.7
BX641066-1|CAE46033.1| 217|Homo sapiens hypothetical protein pr... 31 5.7
BX322609-1|CAI41397.1| 359|Homo sapiens Kruppel-like factor 8 p... 31 5.7
BC117196-1|AAI17197.1| 1591|Homo sapiens T-cell lymphoma invasio... 31 5.7
BC117192-1|AAI17193.1| 1591|Homo sapiens T-cell lymphoma invasio... 31 5.7
BC112109-1|AAI12110.1| 359|Homo sapiens Kruppel-like factor 8 p... 31 5.7
BC105130-1|AAI05131.1| 359|Homo sapiens Kruppel-like factor 8 p... 31 5.7
BC031355-1|AAH31355.1| 228|Homo sapiens KLF8 protein protein. 31 5.7
AL078591-1|CAB89265.1| 1515|Homo sapiens KIAA1411 protein. 31 5.7
AL050309-2|CAI42343.1| 359|Homo sapiens Kruppel-like factor 8 p... 31 5.7
AB209101-1|BAD92338.1| 1060|Homo sapiens T-cell lymphoma invasio... 31 5.7
AB209004-1|BAD92241.1| 455|Homo sapiens Hypothetical protein DK... 31 5.7
AB037832-1|BAA92649.1| 1522|Homo sapiens KIAA1411 protein protein. 31 5.7
L01042-1|AAD54608.1| 1093|Homo sapiens TATA element modulatory f... 31 7.6
BC126123-1|AAI26124.1| 1093|Homo sapiens TATA element modulatory... 31 7.6
BC117418-1|AAI17419.1| 1093|Homo sapiens TATA element modulatory... 31 7.6
AF487905-1|AAM14565.1| 624|Homo sapiens MLL/AF4 fusion protein ... 31 7.6
AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory... 31 7.6
>Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein.
Length = 1211
Score = 34.7 bits (76), Expect = 0.47
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 350 LISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKC 529
L+S P + Q D+ K+ E +S D+S K+ KRKG+ E NKK
Sbjct: 769 LLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSS-KLAKKRKGEAERDCDNKKI 827
Query: 530 KLSTELENLIRNRQEPSKHS 589
+L E+++ + K S
Sbjct: 828 RLEKEIKSQSSSSSSSHKES 847
>L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich protein
protein.
Length = 1206
Score = 34.7 bits (76), Expect = 0.47
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 350 LISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKC 529
L+S P + Q D+ K+ E +S D+S K+ KRKG+ E NKK
Sbjct: 769 LLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSS-KLAKKRKGEAERDCDNKKI 827
Query: 530 KLSTELENLIRNRQEPSKHS 589
+L E+++ + K S
Sbjct: 828 RLEKEIKSQSSSSSSSHKES 847
>L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion protein
protein.
Length = 2311
Score = 34.7 bits (76), Expect = 0.47
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 350 LISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKC 529
L+S P + Q D+ K+ E +S D+S K+ KRKG+ E NKK
Sbjct: 1869 LLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSS-KLAKKRKGEAERDCDNKKI 1927
Query: 530 KLSTELENLIRNRQEPSKHS 589
+L E+++ + K S
Sbjct: 1928 RLEKEIKSQSSSSSSSHKES 1947
>L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein.
Length = 1210
Score = 34.7 bits (76), Expect = 0.47
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 350 LISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKC 529
L+S P + Q D+ K+ E +S D+S K+ KRKG+ E NKK
Sbjct: 769 LLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSS-KLAKKRKGEAERDCDNKKI 827
Query: 530 KLSTELENLIRNRQEPSKHS 589
+L E+++ + K S
Sbjct: 828 RLEKEIKSQSSSSSSSHKES 847
>BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member 1
protein.
Length = 1211
Score = 34.7 bits (76), Expect = 0.47
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 350 LISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKC 529
L+S P + Q D+ K+ E +S D+S K+ KRKG+ E NKK
Sbjct: 769 LLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSS-KLAKKRKGEAERDCDNKKI 827
Query: 530 KLSTELENLIRNRQEPSKHS 589
+L E+++ + K S
Sbjct: 828 RLEKEIKSQSSSSSSSHKES 847
>U28282-1|AAC99849.1| 359|Homo sapiens zinc finger protein protein.
Length = 359
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 43 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 94
>U16296-1|AAA98443.1| 1591|Homo sapiens TIAM1 protein protein.
Length = 1591
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 314 EINPNMPENPDLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRK 493
E P E PDL SD+ + + Q + F RS Q P QD++G ++ + R+
Sbjct: 975 ETAPEETEGPDLESSDETDHSSKSTEQVAAFCRSLHEMNPSDQNPSPQDSTGPQLATMRQ 1034
>BX641066-1|CAE46033.1| 217|Homo sapiens hypothetical protein
protein.
Length = 217
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 43 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 94
>BX322609-1|CAI41397.1| 359|Homo sapiens Kruppel-like factor 8
protein.
Length = 359
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 43 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 94
>BC117196-1|AAI17197.1| 1591|Homo sapiens T-cell lymphoma invasion and
metastasis 1 protein.
Length = 1591
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 314 EINPNMPENPDLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRK 493
E P E PDL SD+ + + Q + F RS Q P QD++G ++ + R+
Sbjct: 975 ETAPEETEGPDLESSDETDHSSKSTEQVAAFCRSLHEMNPSDQSPSPQDSTGPQLATMRQ 1034
>BC117192-1|AAI17193.1| 1591|Homo sapiens T-cell lymphoma invasion and
metastasis 1 protein.
Length = 1591
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 314 EINPNMPENPDLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRK 493
E P E PDL SD+ + + Q + F RS Q P QD++G ++ + R+
Sbjct: 975 ETAPEETEGPDLESSDETDHSSKSTEQVAAFCRSLHEMNPSDQSPSPQDSTGPQLATMRQ 1034
>BC112109-1|AAI12110.1| 359|Homo sapiens Kruppel-like factor 8
protein.
Length = 359
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 43 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 94
>BC105130-1|AAI05131.1| 359|Homo sapiens Kruppel-like factor 8
protein.
Length = 359
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 43 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 94
>BC031355-1|AAH31355.1| 228|Homo sapiens KLF8 protein protein.
Length = 228
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 43 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 94
>AL078591-1|CAB89265.1| 1515|Homo sapiens KIAA1411 protein.
Length = 1515
Score = 31.1 bits (67), Expect = 5.7
Identities = 24/118 (20%), Positives = 49/118 (41%)
Frame = +2
Query: 407 DRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLIRNRQEPSKH 586
+ SN + + + K+ + K L K+ + +++V KC ST +LI+ + H
Sbjct: 485 EESNKSKVKVTKLMKTMKSENTKKLIKQNSKDSVVLVGYKCLKSTASNDLIKCFEGNPSH 544
Query: 587 SLSIDNGGKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQISSTQTEPV 760
S Y D + Y +Q + + P + E + +K + + Q +P+
Sbjct: 545 SQKEGLDPTICGY-NFDPKTYMRQTSQKEASCLPTNTERTEQKSPDIENVQPDQFDPL 601
>AL050309-2|CAI42343.1| 359|Homo sapiens Kruppel-like factor 8
protein.
Length = 359
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 43 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 94
>AB209101-1|BAD92338.1| 1060|Homo sapiens T-cell lymphoma invasion
and metastasis 1 variant protein.
Length = 1060
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 314 EINPNMPENPDLLISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRK 493
E P E PDL SD+ + + Q + F RS Q P QD++G ++ + R+
Sbjct: 804 ETAPEETEGPDLESSDETDHSSKSTEQVAAFCRSLHEMNPSDQSPSPQDSTGPQLATMRQ 863
>AB209004-1|BAD92241.1| 455|Homo sapiens Hypothetical protein
DKFZp686O08126 variant protein.
Length = 455
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 QQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISD--KPNLIPQHLNQHSP 403
+ +TSP + + NP+ P + +I PE +LL SD P + P L+ H P
Sbjct: 121 RSNMTSPTLLDANPMENPALFNDIKIEPPE--ELLASDFSLPQVEPVDLSFHKP 172
>AB037832-1|BAA92649.1| 1522|Homo sapiens KIAA1411 protein protein.
Length = 1522
Score = 31.1 bits (67), Expect = 5.7
Identities = 24/118 (20%), Positives = 49/118 (41%)
Frame = +2
Query: 407 DRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLIRNRQEPSKH 586
+ SN + + + K+ + K L K+ + +++V KC ST +LI+ + H
Sbjct: 492 EESNKSKVKVTKLMKTMKSENTKKLIKQNSKDSVVLVGYKCLKSTASNDLIKCFEGNPSH 551
Query: 587 SLSIDNGGKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQISSTQTEPV 760
S Y D + Y +Q + + P + E + +K + + Q +P+
Sbjct: 552 SQKEGLDPTICGY-NFDPKTYMRQTSQKEASCLPTNTERTEQKSPDIENVQPDQFDPL 608
>L01042-1|AAD54608.1| 1093|Homo sapiens TATA element modulatory
factor protein.
Length = 1093
Score = 30.7 bits (66), Expect = 7.6
Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 6/190 (3%)
Frame = +2
Query: 215 KTIKESVVRGSQQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISDKP-----NLIP 379
KT++ + G +++ V T + P E PD+L+S P ++
Sbjct: 368 KTVESA--EGKSEEVNETLVIPTEEAEMEESGRSATPVNCEQPDILVSSTPINEGQTVLD 425
Query: 380 QHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLI 559
+ Q P + EK+ K+ + K L KR+ + L + +K L +NL
Sbjct: 426 KVAEQCEPAESQPEALSEKEDVCKTVEFLNEK-LEKREA-QLLSLSKEKALLEEAFDNLK 483
Query: 560 RNRQEPSKHSLSIDN-GGKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQI 736
+ S SI + + E+ + C + D K I N K+ +++
Sbjct: 484 DEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKN----IKEELATRL 539
Query: 737 SSTQTEPVLE 766
+S++T +L+
Sbjct: 540 NSSETADLLK 549
>BC126123-1|AAI26124.1| 1093|Homo sapiens TATA element modulatory
factor 1 protein.
Length = 1093
Score = 30.7 bits (66), Expect = 7.6
Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 6/190 (3%)
Frame = +2
Query: 215 KTIKESVVRGSQQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISDKP-----NLIP 379
KT++ + G +++ V T + P E PD+L+S P ++
Sbjct: 368 KTVESA--EGKSEEVNETLVIPTEEAEMEESGRSATPVNCEQPDILVSSTPINEGQTVLD 425
Query: 380 QHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLI 559
+ Q P + EK+ K+ + K L KR+ + L + +K L +NL
Sbjct: 426 KVAEQCEPAESQPEALSEKEDVCKTVEFLNEK-LEKREA-QLLSLSKEKALLEEAFDNLK 483
Query: 560 RNRQEPSKHSLSIDN-GGKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQI 736
+ S SI + + E+ + C + D K I N K+ +++
Sbjct: 484 DEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKN----IKEELATRL 539
Query: 737 SSTQTEPVLE 766
+S++T +L+
Sbjct: 540 NSSETADLLK 549
>BC117418-1|AAI17419.1| 1093|Homo sapiens TATA element modulatory
factor 1 protein.
Length = 1093
Score = 30.7 bits (66), Expect = 7.6
Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 6/190 (3%)
Frame = +2
Query: 215 KTIKESVVRGSQQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISDKP-----NLIP 379
KT++ + G +++ V T + P E PD+L+S P ++
Sbjct: 368 KTVESA--EGKSEEVNETLVIPTEEAEMEESGRSATPVNCEQPDILVSSTPINEGQTVLD 425
Query: 380 QHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLI 559
+ Q P + EK+ K+ + K L KR+ + L + +K L +NL
Sbjct: 426 KVAEQCEPAESQPEALSEKEDVCKTVEFLNEK-LEKREA-QLLSLSKEKALLEEAFDNLK 483
Query: 560 RNRQEPSKHSLSIDN-GGKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQI 736
+ S SI + + E+ + C + D K I N K+ +++
Sbjct: 484 DEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKN----IKEELATRL 539
Query: 737 SSTQTEPVLE 766
+S++T +L+
Sbjct: 540 NSSETADLLK 549
>AF487905-1|AAM14565.1| 624|Homo sapiens MLL/AF4 fusion protein
protein.
Length = 624
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 350 LISDKPNLIPQHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKC 529
L+S P + Q D+ K+ E +S D+S K+ KRKG+ E NKK
Sbjct: 562 LLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSS-KLAKKRKGEAERDCDNKKI 620
Query: 530 KL 535
+L
Sbjct: 621 RL 622
>AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory
factor 1 variant protein.
Length = 1096
Score = 30.7 bits (66), Expect = 7.6
Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 6/190 (3%)
Frame = +2
Query: 215 KTIKESVVRGSQQKITSPCVSETNPIGQPKVMTEINPNMPENPDLLISDKP-----NLIP 379
KT++ + G +++ V T + P E PD+L+S P ++
Sbjct: 371 KTVESA--EGKSEEVNETLVIPTEEAEMEESGRSATPVNCEQPDILVSSTPINEGQTVLD 428
Query: 380 QHLNQHSPFDRSNTTAKEKKQEPKSQDTSGGKVLSKRKGDEELMIVNKKCKLSTELENLI 559
+ Q P + EK+ K+ + K L KR+ + L + +K L +NL
Sbjct: 429 KVAEQCEPAESQPEALSEKEDVCKTVEFLNEK-LEKREA-QLLSLSKEKALLEEAFDNLK 486
Query: 560 RNRQEPSKHSLSIDN-GGKSVNYCTRDEENYKKQCTDVDVVNKPIDNEFSLRKQNEGSQI 736
+ S SI + + E+ + C + D K I N K+ +++
Sbjct: 487 DEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKN----IKEELATRL 542
Query: 737 SSTQTEPVLE 766
+S++T +L+
Sbjct: 543 NSSETADLLK 552
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,672,051
Number of Sequences: 237096
Number of extensions: 2666613
Number of successful extensions: 6771
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6752
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -