Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_N03
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0888 + 6805071-6805485,6806202-6806374,6806501-6806549,680...   121   7e-28
02_02_0699 + 13055146-13055758,13056230-13056324                       29   5.0  
05_05_0013 - 21509307-21509493,21509762-21510123                       29   6.7  
03_02_0431 - 8384259-8384266,8384649-8384787,8385875-8386067,838...    29   6.7  
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310...    28   8.8  

>06_01_0888 +
           6805071-6805485,6806202-6806374,6806501-6806549,
           6806654-6806820,6806919-6807002,6807097-6807135
          Length = 308

 Score =  121 bits (292), Expect = 7e-28
 Identities = 53/77 (68%), Positives = 63/77 (81%)
 Frame = +1

Query: 52  WWGRLVTTDPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEV 231
           WW  +V  DPE+ T+K+ PE SKL+DLD ETR  VEKMM+DQRQK+MGLPTSDE +KQ++
Sbjct: 230 WWKSVVKGDPEVDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKQMGLPTSDEMQKQDM 289

Query: 232 LKKFMEQHPEMDFSKCK 282
           LKKFM QHPEMDFS  K
Sbjct: 290 LKKFMAQHPEMDFSNAK 306


>02_02_0699 + 13055146-13055758,13056230-13056324
          Length = 235

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 85  ISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQ---KEMGLPTSDEQKKQEVLKKFMEQH 255
           +ST++I   P   SD DG+  G  EK+  +Q++    E+ LP   ++++  +  +  +  
Sbjct: 99  VSTKEITKFPEMTSDPDGKLDGKKEKLYPEQKEAIVSEISLPQILKKEETHIAVEVDDGS 158

Query: 256 PEMDFS 273
             M+ S
Sbjct: 159 SNMELS 164


>05_05_0013 - 21509307-21509493,21509762-21510123
          Length = 182

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 224 KKYSRNSWNNIQRWTSPNANSTKV 295
           +KY R  W NI RW+      T+V
Sbjct: 128 EKYGRGDWRNISRWSVKTRTPTQV 151


>03_02_0431 -
           8384259-8384266,8384649-8384787,8385875-8386067,
           8386180-8387702
          Length = 620

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +1

Query: 106 PEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEVL 234
           P PS  + + G  RG +   ++++++++  LP   EQK   +L
Sbjct: 96  PGPSPSASVPGSRRGFLYGFVFNRQRQDERLPRGGEQKSVVIL 138


>03_06_0135 +
           31928838-31929698,31929783-31929932,31930795-31931065,
           31931157-31931249,31931442-31931616,31931715-31931960,
           31932100-31932294,31932604-31932802
          Length = 729

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/67 (26%), Positives = 34/67 (50%)
 Frame = +1

Query: 76  DPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEVLKKFMEQH 255
           D  + ++   PEP   ++L+ E    VE+   DQ +KE  LP  +E    +  ++  E+ 
Sbjct: 133 DHAVQSKPAEPEPEPGTELEEEE---VEQ---DQEEKEAELPMPEESGDGKAPEEESEKA 186

Query: 256 PEMDFSK 276
           PE++  +
Sbjct: 187 PELELDE 193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,276,105
Number of Sequences: 37544
Number of extensions: 302225
Number of successful extensions: 662
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)