Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_N02
         (930 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.64 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.64 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   4.5  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 314 VLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTEV 192
           +L   Y+L++  L  ++ +T   S  G+TD  N  +K  E+
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244



 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 103 LNYFQNVFPSCVSCYS 150
           L YF+ VF S +SC S
Sbjct: 88  LRYFEEVFSSLLSCCS 103


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 314 VLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTEV 192
           +L   Y+L++  L  ++ +T   S  G+TD  N  +K  E+
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244



 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 103 LNYFQNVFPSCVSCYS 150
           L YF+ VF S +SC S
Sbjct: 88  LRYFEEVFSSLLSCCS 103


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 123 ISKLCFLLFTILG 161
           IS +CFLL TILG
Sbjct: 44  ISAICFLLSTILG 56


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 323 RWQVLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTEVVTCR-CFHIAYTKN 153
           ++Q L+ L K   +PL CV++    + Y   T+   SS +    +T R  FH A T++
Sbjct: 210 KFQPLLRLPKFKKKPLLCVVSTL--SCYLERTELLRSSGETRLFLTHRKPFHPASTQS 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,993
Number of Sequences: 336
Number of extensions: 2954
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)