Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_N01
         (903 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    32   0.49 
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    32   0.49 

>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26b protein.
          Length = 1133

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = +2

Query: 122 IIPRPKALEEVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 301
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 302 DQPXGQRTGES 334
           ++  G + G+S
Sbjct: 176 EKDPGLKEGDS 186


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26a protein.
          Length = 1172

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = +2

Query: 122 IIPRPKALEEVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 301
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 302 DQPXGQRTGES 334
           ++  G + G+S
Sbjct: 176 EKDPGLKEGDS 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,425,973
Number of Sequences: 27780
Number of extensions: 187554
Number of successful extensions: 463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)