Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_M23
         (884 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.57 
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    24   5.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.4  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   9.4  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 0.57
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 346 DISKMKKKQRKCRMDVTKHSRSRVTCKLNQESLQ 245
           D+ + KKK  + R +  KH +   T KL  E LQ
Sbjct: 795 DLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQ 828


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
 Frame = -1

Query: 560 GNQERCILW--NQSI--VINIYLFGLSISDF 480
           GN   CI+   N+S+    N YLF L++SDF
Sbjct: 62  GNISTCIVIARNRSMHTATNYYLFSLAVSDF 92


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = -2

Query: 340  SKMKKKQRKCRMDVTKHSRSRVTCKLNQESLQLN 239
            S+ K+ Q+    D+ ++ +  + C+L++   Q+N
Sbjct: 3250 SRPKRDQQVSHTDMVEYEKKMLYCRLDEMKTQIN 3283


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = -1

Query: 434  CSFQVTYR----YVKTVECNRVIIQCTFEFIVHRHFQNEKKAKK 315
            CS +VT+     YV  V  N+  +QC++     R  QN++ A +
Sbjct: 964  CSDEVTWNRVAEYVHEVMENQYNLQCSYRGNSDRELQNQEAASQ 1007


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 334 MKKKQRKCRMDVTKHSRSRVTCKLN 260
           + K  R CR    ++  SR TC+ N
Sbjct: 145 LPKSNRNCRTAARRNHSSRNTCRRN 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,305
Number of Sequences: 2352
Number of extensions: 18237
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)