Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_M23
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81532-7|CAJ34990.1|  363|Caenorhabditis elegans Hypothetical pr...    93   3e-19
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    93   3e-19
Z35598-2|CAA84651.2|  656|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AC006816-3|AAK85510.3|  508|Caenorhabditis elegans Hypothetical ...    29   4.4  

>Z81532-7|CAJ34990.1|  363|Caenorhabditis elegans Hypothetical
           protein F36F2.3b protein.
          Length = 363

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
 Frame = +3

Query: 345 SVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLEITNAQTKEIYVDDN 524
           S+HYKF++ LDY T+ FDGLHI    L   I  ++ + K   F+L++ NA TK+ Y DD 
Sbjct: 3   SIHYKFRAELDYKTLQFDGLHIRGEQLVREICAKENL-KLELFELQLQNAHTKKTYSDDE 61

Query: 525 ALIPKNTSLLVARVPLSQQPKKQWEGSNSNSAPHKDVTVNKGLADLSRMEGS-------E 683
            LIP+N+S++V R P     K Q   +  NS     +       D S    S       E
Sbjct: 62  -LIPRNSSIIVQRFPRKDAAKVQKVQAGVNSGMVNQLDATSSFLDPSSHISSAEFENMDE 120

Query: 684 QDKINAMISQSTFDYDPSNYQKIRGQNQRGAVPSNYICYKC 806
            +++N +  QST  YD SN+++ +     G  P  Y C +C
Sbjct: 121 AERLNHIRDQSTRAYDQSNFRRRQPGIMTGPPPPTYTCNRC 161


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
 Frame = +3

Query: 345 SVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLEITNAQTKEIYVDDN 524
           S+HYKF++ LDY T+ FDGLHI    L   I  ++ + K   F+L++ NA TK+ Y DD 
Sbjct: 3   SIHYKFRAELDYKTLQFDGLHIRGEQLVREICAKENL-KLELFELQLQNAHTKKTYSDDE 61

Query: 525 ALIPKNTSLLVARVPLSQQPKKQWEGSNSNSAPHKDVTVNKGLADLSRMEGS-------E 683
            LIP+N+S++V R P     K Q   +  NS     +       D S    S       E
Sbjct: 62  -LIPRNSSIIVQRFPRKDAAKVQKVQAGVNSGMVNQLDATSSFLDPSSHISSAEFENMDE 120

Query: 684 QDKINAMISQSTFDYDPSNYQKIRGQNQRGAVPSNYICYKC 806
            +++N +  QST  YD SN+++ +     G  P  Y C +C
Sbjct: 121 AERLNHIRDQSTRAYDQSNFRRRQPGIMTGPPPPTYTCNRC 161


>Z35598-2|CAA84651.2|  656|Caenorhabditis elegans Hypothetical
           protein F10F2.4 protein.
          Length = 656

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 724 SNVDCDIIAFILSCSLPSMRDRSASPLLTVTSLCGAEL-LFEPSHCFF 584
           ++ DCD I+  + C+ PS+  R+ S L T+  L    L L +P H  F
Sbjct: 22  AHCDCDFISHTVVCNRPSLLIRTVSMLPTIRQLHLNSLNLPQPPHFLF 69


>Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical
           protein T11A5.3 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -1

Query: 656 SQSFINSNIFMWS*ITI*AFPLLLWLLRKWNSGNQERCILWNQSIVINIYLFGLSI 489
           S  F+  ++     ITI A P+L+W   K  S    +    N  I+I ++LFG  +
Sbjct: 14  SSGFLRFSLVFNLVITICAVPVLIWATWKLWSMKYTKLFHVNFKIIIQLHLFGFML 69


>AC006816-3|AAK85510.3|  508|Caenorhabditis elegans Hypothetical
           protein Y71D11A.5 protein.
          Length = 508

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -2

Query: 328 KKQRKCRMDVTKHSRSRVTCKLNQESLQLNNIKI 227
           K Q  C MD+TK     VTC L  ES   N  ++
Sbjct: 185 KLQGPCIMDLTKFPFDNVTCSLTFESFNYNTDEV 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,681,462
Number of Sequences: 27780
Number of extensions: 427681
Number of successful extensions: 1117
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)