Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_M21
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0235 + 1944542-1944761,1945129-1945703                           29   3.8  
08_01_0860 + 8424759-8424790,8424910-8425027,8425264-8425355,842...    29   5.0  
01_06_1200 - 35362412-35362432,35362526-35362715,35362799-353628...    29   5.0  
12_01_0808 + 7418878-7420476                                           28   8.7  

>08_01_0235 + 1944542-1944761,1945129-1945703
          Length = 264

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 508 GQWARSLIINESLDKGSQIPYIKKALAKDYGV-VVLNTNDNHTADGKTILNSSTAEEHAL 684
           G+W R     E L   SQ+PY +K    D G+ V++NT    +  G +++    A +H  
Sbjct: 74  GKWYRLKDHEEKLPPRSQLPYSEK---PDEGIYVLMNTTSYGSIGGSSVVLGPRAWDHCH 130

Query: 685 YAWL 696
            ++L
Sbjct: 131 VSFL 134


>08_01_0860 +
           8424759-8424790,8424910-8425027,8425264-8425355,
           8425952-8426099,8426912-8427052
          Length = 176

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 649 WSFHLLCGCHLYLVP 605
           WS+ LL GCH +L+P
Sbjct: 73  WSWRLLLGCHCFLIP 87


>01_06_1200 -
           35362412-35362432,35362526-35362715,35362799-35362899,
           35362985-35363116,35363204-35363302,35363493-35363568,
           35363649-35363941,35364032-35364160,35364332-35364480,
           35364562-35364633,35364728-35364776,35365039-35365107,
           35365201-35365256,35365357-35365429,35365508-35365584,
           35365847-35365934,35366086-35366259,35366358-35366473,
           35366681-35366984,35367084-35367146,35367224-35367286,
           35367393-35367506,35368672-35368675,35368894-35368952,
           35369024-35369098,35369691-35369798,35372331-35372792
          Length = 1071

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 295 LTTNWNGSSVGCPSAPIFLT*PFESNMYPSSFIVFVPS 182
           LTT W+ + VGCP+  + +  P +S +        +PS
Sbjct: 51  LTTTWSSAGVGCPTKKLVIVSP-DSELKRGRIYFLIPS 87


>12_01_0808 + 7418878-7420476
          Length = 532

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = +1

Query: 490 SGVVRAGQWARSLIINESLDKGSQIPYIKKALAKDYGVVVLNTNDNHTADGKTILNSSTA 669
           S V  AG   R  ++  +L   +   YI   L     +  LN +DN  A G     S+ +
Sbjct: 67  SNVTAAGGEPRRRVVGVALAGKNLSGYIPSELGSLLFLRRLNLHDNRLAGGVPAALSNAS 126

Query: 670 EEHALYAWLNYISNA 714
             H+L+ + N ++ A
Sbjct: 127 SLHSLFLYGNRLTGA 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,101,764
Number of Sequences: 37544
Number of extensions: 455791
Number of successful extensions: 958
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)