Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_M21
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020584-1|AAH20584.1|  416|Homo sapiens chromosome 5 open readi...   101   4e-21

>BC020584-1|AAH20584.1|  416|Homo sapiens chromosome 5 open reading
           frame 21 protein.
          Length = 416

 Score =  101 bits (242), Expect = 4e-21
 Identities = 49/85 (57%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
 Frame = +1

Query: 388 LQKLPIPKDSNDG---TFIFVSKD-YDKKDVLLILIHGSGVVRAGQWARSLIINESLDKG 555
           L+K+ IP D+ +    +FIF+S+D       L++LIHGSGVVRAGQWAR LIINE LD G
Sbjct: 119 LKKVSIPVDATESEPKSFIFMSEDALTNPQKLMVLIHGSGVVRAGQWARRLIINEDLDSG 178

Query: 556 SQIPYIKKALAKDYGVVVLNTNDNH 630
           +QIP+IK+A+A+ YGV+VLN N+N+
Sbjct: 179 TQIPFIKRAVAEGYGVIVLNPNENY 203



 Score = 50.8 bits (116), Expect = 7e-06
 Identities = 24/61 (39%), Positives = 38/61 (62%)
 Frame = +1

Query: 649 ILNSSTAEEHALYAWLNYISNANASSILIVAHSYGGVVTVSLXRRGAKXTLKXRVKAIAF 828
           I  + + EEHA+Y W ++I+ A A ++  VAHSYGG+  V L  +  +  +K +V A+A 
Sbjct: 261 IRENGSPEEHAIYVWDHFIAQAAAENVFFVAHSYGGLAFVELMIQ-READVKNKVTAVAL 319

Query: 829 T 831
           T
Sbjct: 320 T 320



 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +3

Query: 195 TMKELGYIFDSNGQVRKIGADGQPTDEPFQFVVSND-HQECQAHYEELGSAITNYVYDIL 371
           T++   Y F+  GQ+R I      T EPF F    D H+  Q  YE LG  IT YVY++L
Sbjct: 59  TLEGFEYAFNEKGQLRHI-----KTGEPFVFNYREDLHRWNQKRYEALGEIITKYVYELL 113

Query: 372 QNSDWIAKVTNP 407
           +    + KV+ P
Sbjct: 114 EKDCNLKKVSIP 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,929,747
Number of Sequences: 237096
Number of extensions: 2606652
Number of successful extensions: 4252
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4252
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)