Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_M17
(1079 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.066
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.066
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.35
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.35
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 31 1.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 29 7.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 7.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 7.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 7.6
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.066
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRX-PPAXGPXXPQRPPE-RXPXGXXPX 927
P S P PP GR P P SR PP G P PP R P G P
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Query: 928 PXP 936
P P
Sbjct: 351 PPP 353
Score = 34.7 bits (76), Expect = 0.12
Identities = 24/82 (29%), Positives = 28/82 (34%)
Frame = +1
Query: 295 PPXXTLLSXXXXGQSPLXTQPXPXAASPTXAXPXPDRTXXXXXAPVXPXPXRXPPXLXAP 474
PP + GQ P P P + +P P P P P PP P
Sbjct: 246 PPLMGMAQSGYQGQYP-PVPPPPPSVTPMPP-PMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
Query: 475 LSYTPXPWRXRXPGXXPPHPPA 540
TP P PG PP PP+
Sbjct: 304 PGRTPGP--PGMPGMPPPPPPS 323
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 GQSPLXTQPXPXAASPTXAXPXPDRTXXXXXAP---VXPXPXRXPPXLXAPLSYTPXPWR 501
G +P P P P P RT P P P R P + P P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP-G 340
Query: 502 XRXPGXXPPHPP 537
R PG PP PP
Sbjct: 341 MRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.066
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRX-PPAXGPXXPQRPPE-RXPXGXXPX 927
P S P PP GR P P SR PP G P PP R P G P
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Query: 928 PXP 936
P P
Sbjct: 361 PPP 363
Score = 34.7 bits (76), Expect = 0.12
Identities = 24/82 (29%), Positives = 28/82 (34%)
Frame = +1
Query: 295 PPXXTLLSXXXXGQSPLXTQPXPXAASPTXAXPXPDRTXXXXXAPVXPXPXRXPPXLXAP 474
PP + GQ P P P + +P P P P P PP P
Sbjct: 256 PPLMGMAQSGYQGQYP-PVPPPPPSVTPMPP-PMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
Query: 475 LSYTPXPWRXRXPGXXPPHPPA 540
TP P PG PP PP+
Sbjct: 314 PGRTPGP--PGMPGMPPPPPPS 333
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 GQSPLXTQPXPXAASPTXAXPXPDRTXXXXXAP---VXPXPXRXPPXLXAPLSYTPXPWR 501
G +P P P P P RT P P P R P + P P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP-G 350
Query: 502 XRXPGXXPPHPP 537
R PG PP PP
Sbjct: 351 MRYPGGMPPPPP 362
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.1 bits (72), Expect = 0.35
Identities = 46/178 (25%), Positives = 49/178 (27%), Gaps = 10/178 (5%)
Frame = +1
Query: 427 PVXPXPXRXPPXLXAPLSYTPXPWRXRXPGXXPPHPPAXXXXXXXXXXXXXXXXXLPHPX 606
P P P PP P S P P PG PPHP LP P
Sbjct: 61 PPAPRPSGQPPGPQGP-SDLPGP-SGAPPG--PPHPSGPPHRPHPHPSRRPRPTRLPRPS 116
Query: 607 X-PRXXLPXXRSACXGX-----RHQ----PPXEAXRLAIXXXXXXXXXXXXXXXXXLGXP 756
P P +A G +H PP G P
Sbjct: 117 RSPHSDAPEPSAATDGFELVFGKHHSTGAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAP 176
Query: 757 XSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPXP 930
S GP P G P G G S PP+ GP P P P G P P
Sbjct: 177 PS-GGPPGPFGPSGAPPSGGPPGPFN----PSEAPPSGGPTGPFDPSGAPPSGGPPGP 229
Score = 32.3 bits (70), Expect = 0.62
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 474 GAPPS-GGPPGPFDPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFDPSGAPPSGMPPV 528
Query: 928 PXP 936
P P
Sbjct: 529 PLP 531
Score = 31.5 bits (68), Expect = 1.1
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 219 GAPPS-GGPPGPFNPSGAPPSGGPPGPFDPSGA----PPSGGPPGPFNPSGAPPSGGPPG 273
Query: 928 P 930
P
Sbjct: 274 P 274
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 369 GAPPS-GGPPGPFDPSGAPPSGGPPGPFDPSGA----PPSGGPPGPFNPSGAPPSGGPPG 423
Query: 928 P 930
P
Sbjct: 424 P 424
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 399 GAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFNPSGAPPSGGPPG 453
Query: 928 P 930
P
Sbjct: 454 P 454
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 414 GAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFNPSGAPPSGGPPG 468
Query: 928 P 930
P
Sbjct: 469 P 469
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 429 GAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFNPSGAPPSGGPPG 483
Query: 928 P 930
P
Sbjct: 484 P 484
Score = 30.7 bits (66), Expect = 1.9
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 249 GAPPS-GGPPGPFNPSGAPPSGGPPGPFDPSGA----PPSGGPPGPFDPSGAPPSGGPPG 303
Query: 928 P 930
P
Sbjct: 304 P 304
Score = 30.7 bits (66), Expect = 1.9
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 339 GAPPS-GGPPGPFNPSGAPPSGGPPGPFDPSGA----PPSGGPPGPFDPSGAPPSGGPPG 393
Query: 928 P 930
P
Sbjct: 394 P 394
Score = 30.7 bits (66), Expect = 1.9
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 384 GAPPS-GGPPGPFDPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFNPSGAPPSGGPPG 438
Query: 928 P 930
P
Sbjct: 439 P 439
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 264 GAPPS-GGPPGPFDPSGAPPSGGPPGPFDPSGA----PPSGGPPGPFDPSGAQPSGGPPG 318
Query: 928 P 930
P
Sbjct: 319 P 319
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 444 GAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFDPSGAPPSGGPPG 498
Query: 928 P 930
P
Sbjct: 499 P 499
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 234 GAPPS-GGPPGPFDPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFDPSGAPPSGGPPG 288
Query: 928 P 930
P
Sbjct: 289 P 289
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 294 GAPPS-GGPPGPFDPSGAQPSGGPPGPFNPSGA----PPSGGPPGPFDPSGAPPSGGPPG 348
Query: 928 P 930
P
Sbjct: 349 P 349
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 769 GPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPXP 930
GP P G P G G A PP+ GP P P P G P P
Sbjct: 315 GPPGPFNPSGAPPSGGPPGPFDPSGA----PPSGGPPGPFNPSGAPPSGGPPGP 364
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 748 GXPXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPERXPXGXXPX 927
G P S GP P G P G G A PP+ GP P P P G P
Sbjct: 324 GAPPS-GGPPGPFDPSGAPPSGGPPGPFNPSGA----PPSGGPPGPFDPSGAPPSGGPPG 378
Query: 928 P 930
P
Sbjct: 379 P 379
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.35
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = -1
Query: 527 GGXXPGXRXRQGSGVYERGAXRXGGXLXGXGXTGALXXXXVRSGXGQA-XVGEAAXGXGW 351
GG PG G G + RG R GG G G +G G+ G G G
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGG---NGGGRGDWGGNGGGGRGG 98
Query: 350 VXRGDW 333
RGDW
Sbjct: 99 GGRGDW 104
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.1 bits (67), Expect = 1.4
Identities = 23/62 (37%), Positives = 24/62 (38%)
Frame = -1
Query: 539 AGGXGGXXPGXRXRQGSGVYERGAXRXGGXLXGXGXTGALXXXXVRSGXGQAXVGEAAXG 360
AGG GG G R G G RG GG G G GA G G G +A G
Sbjct: 49 AGGTGGGRGGGRGGSGGG---RGGGSGGGR-GGSGGAGAGGSGSGSGGWGGQDGGSSAGG 104
Query: 359 XG 354
G
Sbjct: 105 WG 106
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 30.7 bits (66), Expect = 1.9
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 262 HPNXXASXALXPPXXTLLSXXXXGQSPLXTQPXPXAASPTXAXPX-PDRTXXXXXAPVXP 438
H + +L P S QSP T P P P + +PV P
Sbjct: 428 HGSSPMGSSLMPLNGQYPSMTQNMQSPASTSMEPTFKEPAVPIRHSPSQMPTHLQSPVHP 487
Query: 439 XPXRXPPXLXAP-LSYTPXPWRXRXP 513
P PP AP S TP P + + P
Sbjct: 488 SPNGAPPAYNAPSSSKTPDPTQQQRP 513
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 30.7 bits (66), Expect = 1.9
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 262 HPNXXASXALXPPXXTLLSXXXXGQSPLXTQPXPXAASPTXAXPX-PDRTXXXXXAPVXP 438
H + +L P S QSP T P P P + +PV P
Sbjct: 428 HGSSPMGSSLMPLNGQYPSMTQNMQSPASTSMEPTFKEPAVPIRHSPSQMPTHLQSPVHP 487
Query: 439 XPXRXPPXLXAP-LSYTPXPWRXRXP 513
P PP AP S TP P + + P
Sbjct: 488 SPNGAPPAYNAPSSSKTPDPTQQQRP 513
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +1
Query: 772 PXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXG--PXXPQRPPERXPXGXXPXP 930
P PP G P P A S PP G P P P P G P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPE-RXPXGXXPXP 930
P A PP G P P S PP G P PP P G P P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQR----PPERXPXGXX 921
P + +G PP G P P PPA G P R PP P G
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Query: 922 P 924
P
Sbjct: 308 P 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +1
Query: 772 PXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXG--PXXPQRPPERXPXGXXPXP 930
P PP G P P A S PP G P P P P G P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPE-RXPXGXXPXP 930
P A PP G P P S PP G P PP P G P P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQR----PPERXPXGXX 921
P + +G PP G P P PPA G P R PP P G
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Query: 922 P 924
P
Sbjct: 329 P 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +1
Query: 772 PXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXG--PXXPQRPPERXPXGXXPXP 930
P PP G P P A S PP G P P P P G P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQRPPE-RXPXGXXPXP 930
P A PP G P P S PP G P PP P G P P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Frame = +1
Query: 754 PXSXAGPXPPXLXXGRXPXGXXXGXXPRXXAXSRXPPAXGPXXPQR----PPERXPXGXX 921
P + +G PP G P P PPA G P R PP P G
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Query: 922 P 924
P
Sbjct: 314 P 314
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.9 bits (64), Expect = 3.3
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 355 PXPXAASPTXAXPXPDRTXXXXXA-PVXPXPXRXPPXLXAPLSYTPXPWR-XRXPGXXPP 528
P P +A PT P T P P P PP S +P P + P PP
Sbjct: 435 PPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
Query: 529 HPP 537
PP
Sbjct: 495 LPP 497
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical protein
R06A4.9 protein.
Length = 809
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 884 PNAPPSG-XRXARGXRPPPTXALASXAHPPPTXXRXAXPR 1000
PN PPSG RG P + HPPP + PR
Sbjct: 701 PNQPPSGEPEHWRGPPPVSHQQQSQQQHPPPINMQRMDPR 740
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 355 PXPXAASPTXAXPXPDRTXXXXXAPVXPXPXRXPPXLXAPLSYTPXPWRXRXPGXXPPHP 534
P P P P P P PP P+S P P PG PP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPP 772
Query: 535 P 537
P
Sbjct: 773 P 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 355 PXPXAASPTXAXPXPDRTXXXXXAPVXPXPXRXPPXLXAPLSYTPXPWRXRXPGXXPPHP 534
P P P P P P PP P+S P P PG PP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPP 772
Query: 535 P 537
P
Sbjct: 773 P 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 355 PXPXAASPTXAXPXPDRTXXXXXAPVXPXPXRXPPXLXAPLSYTPXPWRXRXPGXXPPHP 534
P P P P P P PP P+S P P PG PP P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPP 355
Query: 535 P 537
P
Sbjct: 356 P 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,770,251
Number of Sequences: 27780
Number of extensions: 163779
Number of successful extensions: 737
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2898039926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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