Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_M16
(998 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 34 0.70
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 34 0.70
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 34 0.70
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 34 0.70
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 34 0.70
BC059173-1|AAH59173.1| 524|Homo sapiens F-box and leucine-rich ... 33 1.6
AK098777-1|BAC05410.1| 554|Homo sapiens protein ( Homo sapiens ... 33 1.6
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 33 2.1
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 33 2.1
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 33 2.1
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 33 2.1
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 33 2.1
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 33 2.1
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 33 2.1
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 33 2.1
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 33 2.1
AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens ... 33 2.1
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 33 2.1
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 33 2.1
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 33 2.1
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 33 2.1
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 33 2.1
BC033084-1|AAH33084.1| 1164|Homo sapiens formin homology 2 domai... 32 2.8
AY192154-1|AAO38757.1| 1164|Homo sapiens FHOS protein. 32 2.8
AF113615-1|AAD39906.1| 1164|Homo sapiens FH1/FH2 domain-containi... 32 2.8
AB209584-1|BAD92821.1| 1017|Homo sapiens P127 variant protein. 32 2.8
AB041046-1|BAD06250.1| 1164|Homo sapiens p127 protein. 32 2.8
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 32 3.7
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 3.7
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 32 3.7
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 32 3.7
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 32 3.7
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 32 3.7
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 3.7
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 32 3.7
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 3.7
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 3.7
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 32 3.7
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 32 3.7
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 32 3.7
Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated ph... 31 4.9
X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated ph... 31 4.9
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 4.9
BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated ... 31 4.9
BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated ... 31 4.9
AB037732-1|BAA92549.1| 889|Homo sapiens KIAA1311 protein protein. 31 6.5
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 31 8.6
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PP PPPP+ GP P G P R PG
Sbjct: 302 GYGPPPGPPPPQ-QGPPPPPGPFPPRPPG 329
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PP PPPP+ GP P G P R PG
Sbjct: 302 GYGPPPGPPPPQ-QGPPPPPGPFPPRPPG 329
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PP PPPP+ GP P G P R PG
Sbjct: 229 GYGPPPGPPPPQ-QGPPPPPGPFPPRPPG 256
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PP PPPP+ GP P G P R PG
Sbjct: 339 GYGPPPGPPPPQ-QGPPPPPGPFPPRPPG 366
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PP PPPP+ GP P G P R PG
Sbjct: 302 GYGPPPGPPPPQ-QGPPPPPGPFPPRPPG 329
>BC059173-1|AAH59173.1| 524|Homo sapiens F-box and leucine-rich
repeat protein 19 protein.
Length = 524
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 919 PPXXPPPPKXXGPXPGAGXXPXRXPG 996
PP PPPP+ GP P AG P PG
Sbjct: 59 PPLPPPPPRRKGPLP-AGPPPEDVPG 83
>AK098777-1|BAC05410.1| 554|Homo sapiens protein ( Homo sapiens
cDNA FLJ25911 fis, clone CBR04744. ).
Length = 554
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 919 PPXXPPPPKXXGPXPGAGXXPXRXPG 996
PP PPPP+ GP P AG P PG
Sbjct: 75 PPLPPPPPRRKGPLP-AGPPPEDVPG 99
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 32.7 bits (71), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXP 993
PP PPPP P PG G P + P
Sbjct: 30 PPQQQPPPPPPPAPPPGPGPAPPQHP 55
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 865 GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PFP + G PPP PPPP P P P PG
Sbjct: 327 GMLPFPAQPPVVE--GPPPPGLPPPPPILTPPPVNLRPPVPPPG 368
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 32.7 bits (71), Expect = 2.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXPG 996
PPP PPPP GP P P PG
Sbjct: 169 PPPPPPPPPGTDGPVPPPPPPPPPPPG 195
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 865 GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PFP + G PPP PPPP P P P PG
Sbjct: 327 GMLPFPAQPPVVE--GPPPPGLPPPPPILTPPPVNLRPPVPPPG 368
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 32.7 bits (71), Expect = 2.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXPG 996
PPP PPPP GP P P PG
Sbjct: 587 PPPPPPPPPGTDGPVPPPPPPPPPPPG 613
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 865 GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PFP + G PPP PPPP P P P PG
Sbjct: 327 GMLPFPAQPPVVE--GPPPPGLPPPPPILTPPPVNLRPPVPPPG 368
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 865 GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PFP + G PPP PPPP P P P PG
Sbjct: 328 GMLPFPAQPPVVE--GPPPPGLPPPPPILTPPPVNLRPPVPPPG 369
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 865 GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PFP + G PPP PPPP P P P PG
Sbjct: 327 GMLPFPAQPPVVE--GPPPPGLPPPPPILTPPPVNLRPPVPPPG 368
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 865 GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PFP + G PPP PPPP P P P PG
Sbjct: 328 GMLPFPAQPPVVE--GPPPPGLPPPPPILTPPPVNLRPPVPPPG 369
>AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ14550 fis, clone NT2RM2001696. ).
Length = 680
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 865 GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXPG 996
G PFP + G PPP PPPP P P P PG
Sbjct: 24 GMLPFPAQPPVVE--GPPPPGLPPPPPILTPPPVNLRPPVPPPG 65
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 32.7 bits (71), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXP 993
PP PPPP P PG G P + P
Sbjct: 30 PPQQQPPPPPPPAPPPGPGPAPPQHP 55
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 32.7 bits (71), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXP 993
PP PPPP P PG G P + P
Sbjct: 30 PPQQQPPPPPPPAPPPGPGPAPPQHP 55
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 32.7 bits (71), Expect = 2.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXPG 996
PPP PPPP GP P P PG
Sbjct: 478 PPPPPPPPPGTDGPVPPPPPPPPPPPG 504
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 32.7 bits (71), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXP 993
PP PPPP P PG G P + P
Sbjct: 30 PPKQQPPPPPPPAPPPGPGPAPPQHP 55
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 32.7 bits (71), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXP 993
PP PPPP P PG G P + P
Sbjct: 30 PPQQQPPPPPPPAPPPGPGPAPPQHP 55
>BC033084-1|AAH33084.1| 1164|Homo sapiens formin homology 2 domain
containing 1 protein.
Length = 1164
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 874 PFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
P P L PPP PPPP GP P P P
Sbjct: 570 PAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAAP 609
>AY192154-1|AAO38757.1| 1164|Homo sapiens FHOS protein.
Length = 1164
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 874 PFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
P P L PPP PPPP GP P P P
Sbjct: 570 PAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAAP 609
>AF113615-1|AAD39906.1| 1164|Homo sapiens FH1/FH2 domain-containing
protein FHOS protein.
Length = 1164
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 874 PFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
P P L PPP PPPP GP P P P
Sbjct: 570 PAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAAP 609
>AB209584-1|BAD92821.1| 1017|Homo sapiens P127 variant protein.
Length = 1017
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 874 PFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
P P L PPP PPPP GP P P P
Sbjct: 423 PAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAAP 462
>AB041046-1|BAD06250.1| 1164|Homo sapiens p127 protein.
Length = 1164
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 874 PFPXTXKXLXXXGXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
P P L PPP PPPP GP P P P
Sbjct: 570 PAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAAP 609
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 31.9 bits (69), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 878 SPXRPXTXXGXAPPPRXXLPPXNXXAPXXAPVP 976
SP RP G APP PP A APVP
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGACAPVP 141
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/110 (22%), Positives = 28/110 (25%), Gaps = 8/110 (7%)
Frame = +1
Query: 661 PXSRXXXPXXPXPRXXPXXPXXPXXXXXXXXXXXXXXXLVXPRKPPPRXXXIXXXXXXXX 840
P SR P P P P P P PPP +
Sbjct: 281 PPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPPPN 340
Query: 841 XXXXXXXX--------GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPG 966
G P P + + PPP PPPP P PG
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPG 390
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/110 (22%), Positives = 28/110 (25%), Gaps = 8/110 (7%)
Frame = +1
Query: 661 PXSRXXXPXXPXPRXXPXXPXXPXXXXXXXXXXXXXXXLVXPRKPPPRXXXIXXXXXXXX 840
P SR P P P P P P PPP +
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 841 XXXXXXXX--------GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPG 966
G P P + + PPP PPPP P PG
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPG 390
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = +2
Query: 527 PXPXSRPXEXPXAXPXGRAFHXPXXAPPGGXXGAPXFXGXAPT*XHXLAXPRPXGLXPXX 706
P P P P A P R P PPG GAP F P L P P L P
Sbjct: 406 PMPGPPPLGPPPAPPL-RPPGPPTGLPPGPPPGAPPF--LRPPGMPGLRGPLPRLLPPGP 462
Query: 707 XRXXPXXPXXPXPLAVP 757
P P P +P
Sbjct: 463 PPGRPPGPPPGPPPGLP 479
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = +2
Query: 527 PXPXSRPXEXPXAXPXGRAFHXPXXAPPGGXXGAPXFXGXAPT*XHXLAXPRPXGLXPXX 706
P P P P A P R P PPG GAP F P L P P L P
Sbjct: 165 PMPGPPPLGPPPAPPL-RPPGPPTGLPPGPPPGAPPF--LRPPGMPGLRGPLPRLLPPGP 221
Query: 707 XRXXPXXPXXPXPLAVP 757
P P P +P
Sbjct: 222 PPGRPPGPPPGPPPGLP 238
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = +2
Query: 527 PXPXSRPXEXPXAXPXGRAFHXPXXAPPGGXXGAPXFXGXAPT*XHXLAXPRPXGLXPXX 706
P P P P A P R P PPG GAP F P L P P L P
Sbjct: 406 PMPGPPPLGPPPAPPL-RPPGPPTGLPPGPPPGAPPF--LRPPGMPGLRGPLPRLLPPGP 462
Query: 707 XRXXPXXPXXPXPLAVP 757
P P P +P
Sbjct: 463 PPGRPPGPPPGPPPGLP 479
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.9 bits (69), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 878 SPXRPXTXXGXAPPPRXXLPPXNXXAPXXAPVP 976
SP RP G APP PP A APVP
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVP 141
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/110 (22%), Positives = 28/110 (25%), Gaps = 8/110 (7%)
Frame = +1
Query: 661 PXSRXXXPXXPXPRXXPXXPXXPXXXXXXXXXXXXXXXLVXPRKPPPRXXXIXXXXXXXX 840
P SR P P P P P P PPP +
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 841 XXXXXXXX--------GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPG 966
G P P + + PPP PPPP P PG
Sbjct: 341 RMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPG 390
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.9 bits (69), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 878 SPXRPXTXXGXAPPPRXXLPPXNXXAPXXAPVP 976
SP RP G APP PP A APVP
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVP 141
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.9 bits (69), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 878 SPXRPXTXXGXAPPPRXXLPPXNXXAPXXAPVP 976
SP RP G APP PP A APVP
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVP 141
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = +2
Query: 527 PXPXSRPXEXPXAXPXGRAFHXPXXAPPGGXXGAPXFXGXAPT*XHXLAXPRPXGLXPXX 706
P P P P A P R P PPG GAP F P L P P L P
Sbjct: 406 PMPGPPPLGPPPAPPL-RPPGPPTGLPPGPPPGAPPF--LRPPGMPGLRGPLPRLLPPGP 462
Query: 707 XRXXPXXPXXPXPLAVP 757
P P P +P
Sbjct: 463 PPGRPPGPPPGPPPGLP 479
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/110 (22%), Positives = 28/110 (25%), Gaps = 8/110 (7%)
Frame = +1
Query: 661 PXSRXXXPXXPXPRXXPXXPXXPXXXXXXXXXXXXXXXLVXPRKPPPRXXXIXXXXXXXX 840
P SR P P P P P P PPP +
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 841 XXXXXXXX--------GXXPFPXTXKXLXXXGXPPPXXPPPPKXXGPXPG 966
G P P + + PPP PPPP P PG
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPG 390
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.7
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = +2
Query: 527 PXPXSRPXEXPXAXPXGRAFHXPXXAPPGGXXGAPXFXGXAPT*XHXLAXPRPXGLXPXX 706
P P P P A P R P PPG GAP F P L P P L P
Sbjct: 406 PMPGPPPLGPPPAPPL-RPPGPPTGLPPGPPPGAPPF--LRPPGMPGLRGPLPRLLPPGP 462
Query: 707 XRXXPXXPXXPXPLAVP 757
P P P +P
Sbjct: 463 PPGRPPGPPPGPPPGLP 479
>Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein (VASP) protein.
Length = 380
Score = 31.5 bits (68), Expect = 4.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
G PPP PPPP GP P G P P
Sbjct: 169 GPPPPPGPPPP--PGPPPPPGLPPSGVP 194
>X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
G PPP PPPP GP P G P P
Sbjct: 167 GPPPPPGPPPP--PGPPPPPGLPPSGVP 192
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.5 bits (68), Expect = 4.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPGAGXXPXRXP 993
PPP PPP P PGA P + P
Sbjct: 77 PPPPQQPPPPPPPPSPGASYPPPQPP 102
>BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 31.5 bits (68), Expect = 4.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
G PPP PPPP GP P G P P
Sbjct: 169 GPPPPPGPPPP--PGPPPPPGLPPSGVP 194
>BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 31.5 bits (68), Expect = 4.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 910 GXPPPXXPPPPKXXGPXPGAGXXPXRXP 993
G PPP PPPP GP P G P P
Sbjct: 170 GPPPPPGPPPP--PGPPPPPGLPPSGVP 195
>AB037732-1|BAA92549.1| 889|Homo sapiens KIAA1311 protein protein.
Length = 889
Score = 31.1 bits (67), Expect = 6.5
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +1
Query: 910 GXPPPXXP----PPPKXXGPXPGAGXXPXRXPG 996
G PPP P PP GP PG G P PG
Sbjct: 151 GLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPG 183
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +1
Query: 916 PPPXXPPPPKXXGPXPG--AGXXPXRXP 993
PPP PPPP P PG AG P P
Sbjct: 84 PPPPLPPPPPQCRPFPGTDAGERPRPPP 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,368,818
Number of Sequences: 237096
Number of extensions: 1528125
Number of successful extensions: 15054
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 5436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12033
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13323281566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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