Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_M04
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z81531-1|CAB04314.2|  436|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.     28   7.8  
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated...    28   7.8  
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated...    28   7.8  
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated...    28   7.8  
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated...    28   7.8  
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated...    28   7.8  

>U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical
           protein K07C11.10 protein.
          Length = 125

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -3

Query: 776 LERTTYTELRYXQREL*ESATLPEGRKADRYPVSGRVGTRRAHEGAXQGE 627
           L+  T  +L   QRE  E   +PEG+KA R P S    + +++EG    E
Sbjct: 66  LKTITTQKLEKMQREQMERLQVPEGQKA-RTPESAEAESPKSNEGPSTSE 114


>Z81531-1|CAB04314.2|  436|Caenorhabditis elegans Hypothetical
           protein F36D3.1 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 467 RTCEQKASKRPGTVKRPRCWRFSIGSAPLYEHH 565
           R CE    +  G  KR   W F +G   +Y +H
Sbjct: 327 RDCEDWNLRHKGLSKRAHFWDFELGMVEIYPNH 359


>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
          Length = 1338

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 567 KIDAQVRGGETRQDYKDTRRFPLXSSLVRSPGSDPAAYRIPVRL 698
           K+  Q +G       K+  + P+ + ++ SPG D    +IP+R+
Sbjct: 439 KLIPQDKGETPSHSKKEKTQHPVATPILASPGGDQQQQKIPMRM 482


>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
           protein 89, isoform c protein.
          Length = 1393

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 567 KIDAQVRGGETRQDYKDTRRFPLXSSLVRSPGSDPAAYRIPVRL 698
           K+  Q +G       K+  + P+ + ++ SPG D    +IP+R+
Sbjct: 403 KLIPQDKGETPSHSKKEKTQHPVATPILASPGGDQQQQKIPMRM 446


>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
           protein 89, isoform d protein.
          Length = 1396

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 567 KIDAQVRGGETRQDYKDTRRFPLXSSLVRSPGSDPAAYRIPVRL 698
           K+  Q +G       K+  + P+ + ++ SPG D    +IP+R+
Sbjct: 406 KLIPQDKGETPSHSKKEKTQHPVATPILASPGGDQQQQKIPMRM 449


>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
            protein 89, isoform g protein.
          Length = 7122

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 567  KIDAQVRGGETRQDYKDTRRFPLXSSLVRSPGSDPAAYRIPVRL 698
            K+  Q +G       K+  + P+ + ++ SPG D    +IP+R+
Sbjct: 7027 KLIPQDKGETPSHSKKEKTQHPVATPILASPGGDQQQQKIPMRM 7070


>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
            protein 89, isoform f protein.
          Length = 7441

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 567  KIDAQVRGGETRQDYKDTRRFPLXSSLVRSPGSDPAAYRIPVRL 698
            K+  Q +G       K+  + P+ + ++ SPG D    +IP+R+
Sbjct: 6451 KLIPQDKGETPSHSKKEKTQHPVATPILASPGGDQQQQKIPMRM 6494


>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
            protein 89, isoform b protein.
          Length = 8081

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 567  KIDAQVRGGETRQDYKDTRRFPLXSSLVRSPGSDPAAYRIPVRL 698
            K+  Q +G       K+  + P+ + ++ SPG D    +IP+R+
Sbjct: 7091 KLIPQDKGETPSHSKKEKTQHPVATPILASPGGDQQQQKIPMRM 7134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,924,111
Number of Sequences: 27780
Number of extensions: 390968
Number of successful extensions: 839
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)