Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_M03
(895 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 109 9e-23
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 1e-17
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 52 2e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.021
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 41 0.049
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 35 2.4
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 35 2.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.4
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 109 bits (262), Expect = 9e-23
Identities = 61/101 (60%), Positives = 65/101 (64%)
Frame = +1
Query: 487 SKRPGTVKRPRCWRISIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 666
SK+ T R R SIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 667 LXLTGYLSAFLPSGSVALSHSSRX*VSQFGVGXFAPSWAVC 789
L F + + +S FAPSWAVC
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGIS-VRCRSFAPSWAVC 101
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 505 VKRPRCWRISIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 666
V+ PR R SIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 89.4 bits (212), Expect = 1e-16
Identities = 43/55 (78%), Positives = 44/55 (80%)
Frame = +1
Query: 511 RPRCWRISIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPLXL 675
RPR R SIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P L
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGL 132
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 318 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 416
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = -3
Query: 560 MLVRGAEPMEIRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 381
MLVRGAEPME R + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 294 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 452
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 52.4 bits (120), Expect = 2e-05
Identities = 31/82 (37%), Positives = 43/82 (52%)
Frame = -3
Query: 824 GXSGRAEXGGXGHTAQLGANXPTPN*DTXQREL*ESATLPEGRKADRYPVSXRGRNRRAH 645
G S RAE G ++ + P P+ DT ++ P+G+KA++ +GRNRRAH
Sbjct: 19 GRSSRAERGVRAYSPAW-SERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAH 77
Query: 644 EGASRGKRLVSL*SCRVSPPLT 579
EGA+ K SL PPLT
Sbjct: 78 EGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +1
Query: 454 ITQERTCEQKASKRPGTVKRPRCWRISIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 633
I +R + + + P T S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 634 EAPSCALLFRP 666
++PS +LLF P
Sbjct: 104 QSPSYSLLFPP 114
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 667 LXLTGYLSAFLPSGSVALSHSSR 735
L LTGYLSAFLPSGSVALSHSSR
Sbjct: 8 LPLTGYLSAFLPSGSVALSHSSR 30
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 96 DPDMIRYIDEFGQTTTRMQ 152
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 220 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 342
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 40.7 bits (91), Expect = 0.049
Identities = 29/69 (42%), Positives = 32/69 (46%)
Frame = +1
Query: 580 VRGGETRQDYKDTRRFPLEAPSCALLFRPLXLTGYLSAFLPSGSVALSHSSRX*VSQFGV 759
VR GETRQD K P P + F +GSVALSHSS +S
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISA-RC 81
Query: 760 GXFAPSWAV 786
FAPSWAV
Sbjct: 82 RSFAPSWAV 90
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 364 ERGSGRAPNTQTASPRALADSLMQ 293
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 35.1 bits (77), Expect = 2.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 421 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRISIGSAPLTSITKIDAQVRGGETR 600
GG+ V ++GI+ ERT + +P + PR W +S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 601 QDYKDT 618
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 35.1 bits (77), Expect = 2.4
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = -2
Query: 687 QVSGKRQGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGNTPATRPF 508
++ G +GS+Q S+ G++P + GFA+ + +F +A GG + +P + P
Sbjct: 575 RLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPS 634
Query: 507 YGSWP 493
Y S P
Sbjct: 635 YLSVP 639
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 254 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 90
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 427 NTVIHRIRGITQERTCE 477
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.1 bits (72), Expect = 9.8
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -2
Query: 627 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGNTPATRPFYGSWPFAGLLLTCSFLRYPP 448
E GIF GF + L +D C + GG A T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 447 DSVD 436
D +D
Sbjct: 304 DHID 307
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,937,284
Number of Sequences: 1657284
Number of extensions: 16540723
Number of successful extensions: 44194
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 41923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44141
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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