Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_M03
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
01_01_1008 - 7987936-7988628,7988923-7989102                           31   1.6  
06_01_0438 + 3110703-3111945,3112486-3113057                           29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57...    28   8.7  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +1

Query: 520 CWRISIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPL 669
           CWR  +        T  D Q    +    +KD    P + PSC L+F PL
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPL 332


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 723 RKRHASRREKGGQVSGKRQGSEQESARGSFQGETPG 616
           R R   RR  GG+V+G+     +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>06_01_0438 + 3110703-3111945,3112486-3113057
          Length = 604

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 154 HCILVVVCPNSSMYLIMSGSN*PSTKGRSAAAVP 53
           HC + +VC +S+  L++S    P+    ++AA+P
Sbjct: 64  HCFVEIVCADSAGRLLLSAKPRPAPAATTSAALP 97


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
            579266-579370,579975-580028,580244-580344,580454-581423,
            582030-582203,582341-582643,582719-582856,582993-583247,
            584230-584370,585008-585289,585395-585540,585627-585690,
            585723-585799,586285-586301,587728-587867,587972-588029,
            588121-588218,588727-588776,589260-589743
          Length = 2630

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -1

Query: 772  ERTDLHRTEIPXSVSYEKAPRFPKGERRTGIR*AXGV---GTGERTRELPGGN 623
            ERTDL    +P S++       P  + +TG+     +    T ER  ELP G+
Sbjct: 2186 ERTDLSGIPVPRSITTAHQSVVPSWDLQTGVEPTGALCMETTHERQSELPSGS 2238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,407,595
Number of Sequences: 37544
Number of extensions: 500743
Number of successful extensions: 1468
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)