Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_M01
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.77 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.77 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   4.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 601 LHMNSIKLFKQVKDCFVFTSLFWLSVITAVI 693
           +H N +   ++V D F    L W+S+I  V+
Sbjct: 223 MHSNLVTTSEEVCDSFSIFGLVWISLIFVVL 253


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 601 LHMNSIKLFKQVKDCFVFTSLFWLSVITAVI 693
           +H N +   ++V D F    L W+S+I  V+
Sbjct: 223 MHSNLVTTSEEVCDSFSIFGLVWISLIFVVL 253


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -1

Query: 399 LVERPHCCRCGWNDIVHEEEKCV 331
           LV  P   RC      HE E C+
Sbjct: 69  LVGTPETLRCQREGFFHEREPCI 91


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 253  KYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVI 363
            KYL P D    +   + ++ I LR +    FF+ N +
Sbjct: 1242 KYLYPIDENKEEKARIAKELIELRNKSVFAFFMFNAL 1278


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 253  KYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVI 363
            KYL P D    +   + ++ I LR +    FF+ N +
Sbjct: 1242 KYLYPIDENKEEKARIAKELIELRNKSVFAFFMFNAL 1278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,483
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)