Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_L21
(932 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 68 2e-11
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 68 2e-11
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 68 2e-11
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 68 2e-11
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 67 4e-11
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 67.7 bits (158), Expect = 2e-11
Identities = 44/145 (30%), Positives = 59/145 (40%)
Frame = +2
Query: 89 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGILWQTWYEKFPL* 268
+KKTRKLRGHVS NAGG HHHRIN DKYHPG + F L
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 269 XRTRISVQF*T*ISFGH*SLNRRG*SMHLLQMARSPXINIVKAXXXXXXXXXXXPKQPVI 448
+ + + + + + + ++P I++VK P +PVI
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFA-ELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVI 124
Query: 449 VXXXXXXXXXXXXXXDVGGACVLSA 523
V GG C+LSA
Sbjct: 125 VKAKYFSKKAEDKIKKAGGVCLLSA 149
Score = 33.1 bits (72), Expect = 0.56
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 231 YFGKLGMRNFHFXKEQEFLSSFEL 302
YFGK+GMRNFH ++ +F L
Sbjct: 53 YFGKVGMRNFHLRRQHKFRPEINL 76
Score = 29.5 bits (63), Expect = 6.9
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXHQYCQSWILQVARQRQTPQTTC 444
L + F P +NLDKLW+LV + + K P + ++ + P
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123
Query: 445 HSKSKVLLKISREE-NQGCGWCL 510
K+K K + ++ + G CL
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCL 146
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 67.7 bits (158), Expect = 2e-11
Identities = 44/145 (30%), Positives = 59/145 (40%)
Frame = +2
Query: 89 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGILWQTWYEKFPL* 268
+KKTRKLRGHVS NAGG HHHRIN DKYHPG + F L
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 269 XRTRISVQF*T*ISFGH*SLNRRG*SMHLLQMARSPXINIVKAXXXXXXXXXXXPKQPVI 448
+ + + + + + + ++P I++VK P +PVI
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFA-ELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVI 124
Query: 449 VXXXXXXXXXXXXXXDVGGACVLSA 523
V GG C+LSA
Sbjct: 125 VKAKYFSKKAEDKIKKAGGVCLLSA 149
Score = 33.1 bits (72), Expect = 0.56
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 231 YFGKLGMRNFHFXKEQEFLSSFEL 302
YFGK+GMRNFH ++ +F L
Sbjct: 53 YFGKVGMRNFHLRRQHKFRPEINL 76
Score = 29.5 bits (63), Expect = 6.9
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXHQYCQSWILQVARQRQTPQTTC 444
L + F P +NLDKLW+LV + + K P + ++ + P
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123
Query: 445 HSKSKVLLKISREE-NQGCGWCL 510
K+K K + ++ + G CL
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCL 146
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 67.7 bits (158), Expect = 2e-11
Identities = 44/145 (30%), Positives = 59/145 (40%)
Frame = +2
Query: 89 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGILWQTWYEKFPL* 268
+KKTRKLRGHVS NAGG HHHRIN DKYHPG + F L
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 269 XRTRISVQF*T*ISFGH*SLNRRG*SMHLLQMARSPXINIVKAXXXXXXXXXXXPKQPVI 448
+ + + + + + + ++P I++VK P +PVI
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFA-ELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVI 124
Query: 449 VXXXXXXXXXXXXXXDVGGACVLSA 523
V GG C+LSA
Sbjct: 125 VKAKYFSKKAEDKIKKAGGVCLLSA 149
Score = 33.1 bits (72), Expect = 0.56
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 231 YFGKLGMRNFHFXKEQEFLSSFEL 302
YFGK+GMRNFH ++ +F L
Sbjct: 53 YFGKVGMRNFHLRRQHKFRPEINL 76
Score = 29.5 bits (63), Expect = 6.9
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXHQYCQSWILQVARQRQTPQTTC 444
L + F P +NLDKLW+LV + + K P + ++ + P
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123
Query: 445 HSKSKVLLKISREE-NQGCGWCL 510
K+K K + ++ + G CL
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCL 146
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 67.7 bits (158), Expect = 2e-11
Identities = 44/145 (30%), Positives = 59/145 (40%)
Frame = +2
Query: 89 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGILWQTWYEKFPL* 268
+KKTRKLRGHVS NAGG HHHRIN DKYHPG + F L
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 269 XRTRISVQF*T*ISFGH*SLNRRG*SMHLLQMARSPXINIVKAXXXXXXXXXXXPKQPVI 448
+ + + + + + + ++P I++VK P +PVI
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFA-ELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVI 124
Query: 449 VXXXXXXXXXXXXXXDVGGACVLSA 523
V GG C+LSA
Sbjct: 125 VKAKYFSKKAEDKIKKAGGVCLLSA 149
Score = 33.1 bits (72), Expect = 0.56
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 231 YFGKLGMRNFHFXKEQEFLSSFEL 302
YFGK+GMRNFH ++ +F L
Sbjct: 53 YFGKVGMRNFHLRRQHKFRPEINL 76
Score = 29.5 bits (63), Expect = 6.9
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXHQYCQSWILQVARQRQTPQTTC 444
L + F P +NLDKLW+LV + + K P + ++ + P
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123
Query: 445 HSKSKVLLKISREE-NQGCGWCL 510
K+K K + ++ + G CL
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCL 146
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 66.9 bits (156), Expect = 4e-11
Identities = 43/145 (29%), Positives = 59/145 (40%)
Frame = +2
Query: 89 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGILWQTWYEKFPL* 268
+KKTRKLRGHVS N GG HHHRIN DKYHPG + F L
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 269 XRTRISVQF*T*ISFGH*SLNRRG*SMHLLQMARSPXINIVKAXXXXXXXXXXXPKQPVI 448
+ + + + + + + ++P I++VK P +PVI
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFA-ELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVI 124
Query: 449 VXXXXXXXXXXXXXXDVGGACVLSA 523
V + GG C+LSA
Sbjct: 125 VKAKYFSKKAEDKIKEAGGVCLLSA 149
Score = 33.1 bits (72), Expect = 0.56
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 231 YFGKLGMRNFHFXKEQEFLSSFEL 302
YFGK+GMRNFH ++ +F L
Sbjct: 53 YFGKVGMRNFHLRRQHKFRPEINL 76
Score = 29.9 bits (64), Expect = 5.2
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXHQYCQSWILQVARQRQTPQTTC 444
L + F P +NLDKLW+LV + + K P + ++ + P
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123
Query: 445 HSKSKVLLKISREE-NQGCGWCL 510
K+K K + ++ + G CL
Sbjct: 124 IVKAKYFSKKAEDKIKEAGGVCL 146
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,923,448
Number of Sequences: 53049
Number of extensions: 452639
Number of successful extensions: 1381
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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