Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_L19
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81099-1|CAB03187.1|  600|Caenorhabditis elegans Hypothetical pr...    32   0.61 
Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical pr...    32   0.61 
Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical p...    28   10.0 
AL117203-2|CAB55104.1|  321|Caenorhabditis elegans Hypothetical ...    28   10.0 

>Z81099-1|CAB03187.1|  600|Caenorhabditis elegans Hypothetical
           protein K08F9.2 protein.
          Length = 600

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +3

Query: 390 YDASTDKVVTILNEIELYNLSNYTLSTFSEDGKYVLLTKNRRKIYRYSFLAEYSV 554
           Y  + D  +  L +IE  + +  T  +FS+DG+Y+ +T   RK+  YS   ++SV
Sbjct: 463 YKLNGDGRLEELKKIE--HSAEITAVSFSDDGEYLAVTDLARKVIPYSVSTDFSV 515


>Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical
           protein C27C12.7 protein.
          Length = 829

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
 Frame = +3

Query: 441 YNLSNYTLSTFSEDGKYVLLTKNRRKIYRYSFLAEYSVLDIEKRLIYKLSDYP------- 599
           +N   Y +   S + KY   +K   +++R+S    Y ++ I  + +     +        
Sbjct: 142 FNNGEY-VKALSSNMKYAYGSKKVNELWRHSAEYLYHIVKINNKTVSTEQWHVGPEENSL 200

Query: 600 LQVVVWGIGKS---VAYVQDNNVYYVPDITQADYVGAXTTGGVPGEVIRVLLTGXRRGDI 770
           +Q   W    S     YV + N+YY  D  + D     T GG       +         +
Sbjct: 201 IQAFYWNPNASSNDFVYVHNYNLYYQKDPEKPDGAIQLTVGGSTFNRFGLANWLYEEEIL 260

Query: 771 NAAEALWFSPGG-LTRCXXFNDTDVXR 848
            A+ A+W+SP G       F+D +V R
Sbjct: 261 EASSAVWWSPSGRYVSYLRFDDREVNR 287


>Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical
           protein R08H2.13 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 553 TEYSARNEYLYIFLLFFVRSTYF 485
           T +SA+N  +++FL+ F  ST+F
Sbjct: 130 TRFSAKNSPIWVFLILFNSSTWF 152


>AL117203-2|CAB55104.1|  321|Caenorhabditis elegans Hypothetical
           protein Y48C3A.3 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +3

Query: 327 MSVQWISDTTYIYKDPGG--IKKYDASTDKVVTILNEIEL-YNLSNYTLSTFSEDGKYVL 497
           ++  W  D  Y+Y+ P    +        KV T L   ++ Y +   +LST S++G    
Sbjct: 50  LNENWKPDVVYLYQFPRARLLPNLSPFCMKVETWLRMSDITYEIPPCSLSTRSQEGTLPF 109

Query: 498 LTKNRRKIYRYSFL 539
           +  N ++ Y  SF+
Sbjct: 110 VELNGKEYYDSSFI 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,252,558
Number of Sequences: 27780
Number of extensions: 409799
Number of successful extensions: 944
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)