Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_L18
(970 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isofor... 32 3.6
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.6
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.6
AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein. 32 3.6
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.6
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.6
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.6
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.6
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.6
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.6
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.6
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.6
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.6
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.6
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.6
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.6
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.6
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.6
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.6
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 6.3
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 6.3
D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein. 23 9.9
BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, mem... 23 10.0
AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, mem... 23 10.0
AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein. 23 10.0
>AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isoform B
protein.
Length = 837
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 646 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 677
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1764 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1795
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1764 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1795
>AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein.
Length = 837
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 646 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 677
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1766 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1797
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1761 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1792
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1741 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1772
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1764 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1795
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1766 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1797
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1761 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1792
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1741 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1772
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1764 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1795
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1766 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1797
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1761 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1792
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1741 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1772
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1764 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1795
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1766 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1797
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1761 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1792
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 531 PLXPPXXFFFFFXFXXPPPPPPXPXXXPPXFF 436
PL PP F F PP PP P PP F
Sbjct: 1764 PLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1795
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.1 bits (67), Expect = 6.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 484 PPPPPPXXXXXSPPXXXXXXXXXXXFSPLPP 392
PPPPPP SPP PLPP
Sbjct: 109 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPP 139
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.1 bits (67), Expect = 6.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 484 PPPPPPXXXXXSPPXXXXXXXXXXXFSPLPP 392
PPPPPP SPP PLPP
Sbjct: 654 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPP 684
>D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein.
Length = 567
Score = 23.4 bits (48), Expect(3) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 483 PPPPPPXP 460
PPPPPP P
Sbjct: 333 PPPPPPLP 340
Score = 22.2 bits (45), Expect(3) = 9.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 477 PPPPXPXXXPP 445
PPPP P PP
Sbjct: 356 PPPPVPPPPPP 366
Score = 21.4 bits (43), Expect(3) = 9.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 498 FXFXXPPPPPP 466
F PPPPPP
Sbjct: 327 FVSPTPPPPPP 337
>BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 23.4 bits (48), Expect(3) = 10.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 483 PPPPPPXP 460
PPPPPP P
Sbjct: 325 PPPPPPLP 332
Score = 22.2 bits (45), Expect(3) = 10.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 477 PPPPXPXXXPP 445
PPPP P PP
Sbjct: 348 PPPPVPPPPPP 358
Score = 21.4 bits (43), Expect(3) = 10.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 498 FXFXXPPPPPP 466
F PPPPPP
Sbjct: 319 FVSPTPPPPPP 329
>AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 23.4 bits (48), Expect(3) = 10.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 483 PPPPPPXP 460
PPPPPP P
Sbjct: 325 PPPPPPLP 332
Score = 22.2 bits (45), Expect(3) = 10.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 477 PPPPXPXXXPP 445
PPPP P PP
Sbjct: 348 PPPPVPPPPPP 358
Score = 21.4 bits (43), Expect(3) = 10.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 498 FXFXXPPPPPP 466
F PPPPPP
Sbjct: 319 FVSPTPPPPPP 329
>AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein.
Length = 559
Score = 23.4 bits (48), Expect(3) = 10.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 483 PPPPPPXP 460
PPPPPP P
Sbjct: 325 PPPPPPLP 332
Score = 22.2 bits (45), Expect(3) = 10.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 477 PPPPXPXXXPP 445
PPPP P PP
Sbjct: 348 PPPPVPPPPPP 358
Score = 21.4 bits (43), Expect(3) = 10.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 498 FXFXXPPPPPP 466
F PPPPPP
Sbjct: 319 FVSPTPPPPPP 329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.147 0.468
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,810,922
Number of Sequences: 237096
Number of extensions: 1172001
Number of successful extensions: 19359
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10532
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12880737904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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