Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_L17
(951 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 44 1e-04
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 31 1.0
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 31 1.0
09_03_0202 + 13469580-13469585,13469597-13470142 31 1.0
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 31 1.0
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 31 1.0
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 31 1.0
12_02_1282 + 27528159-27529148,27529549-27529614 31 1.8
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 29 5.4
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 29 5.4
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 28 9.5
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 28 9.5
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +2
Query: 191 LYGGDEIGALLFDPGHHSLRVGXAQEDTPKADIPAV 298
+YGGDE+ A++ D G +S + G A +DTPKA P++
Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +1
Query: 595 REKXADLIFXKYQXPAFFLVXNAXLXAFANGKIYS 699
REK A+L+F KY+ PA FL NA L +FA+G+ S
Sbjct: 183 REKAAELMFEKYKVPALFLAKNAVLTSFASGRATS 217
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 377 KAGSELRHYIDVTELHVPRPGMEVQTYMKDGXVDNWDLFEKM 502
KA ++ + Y+ EL R MEV + MKDG V +WD+ + +
Sbjct: 112 KAKTKRKLYVG-QELEFRRDHMEVISPMKDGTVTDWDIVDNI 152
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 200 GDEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
G++I L+ D G ++ G A +D P+A P++VG
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 200 GDEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
G++I L+ D G ++ G A +D P+A P++VG
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
>09_03_0202 + 13469580-13469585,13469597-13470142
Length = 183
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 313 WPDAHNCWYISFWGI-LLCXTNSQRMMTRIKE*C 215
WPD H+CW + G NS+R+M K C
Sbjct: 17 WPDMHSCWCMRHMGANFFKQFNSRRLMNMFKRLC 50
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 200 GDEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
G++I L+ D G ++ G A +D P+A P++VG
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 200 GDEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
G++I L+ D G ++ G A +D P+A P++VG
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 595 REKXADLIFXKYQXPAFFLVXNAXLXAFANGKI 693
REK ++F + PA ++ A L +A+G+I
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRI 150
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 200 GDEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
G++I L+ D G ++ G A +D P+A P++VG
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 203 DEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
D+I L+ D G ++ G A +D P+A P++VG
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 203 DEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
++I L+ D G ++ G A +D P+A P++VG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 203 DEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
++I L+ D G ++ G A +D P+A P++VG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG 38
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 203 DEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
++I ++ D G ++ G A +D P+A P++VG
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVG 37
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 203 DEIGALLFDPGHHSLRVGXAQEDTPKADIPAVVG 304
++I ++ D G ++ G A +D P+A P++VG
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVG 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,756,875
Number of Sequences: 37544
Number of extensions: 441194
Number of successful extensions: 972
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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