Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_L16
(882 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 112 1e-23
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 8e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 58 3e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 53 8e-06
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.027
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.45
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 36 1.0
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.8
UniRef50_A0TR77 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_A7LR53 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A1CZ73 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.3
UniRef50_Q8BJE3 Cluster: 12 days embryo eyeball cDNA, RIKEN full... 33 7.3
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.3
UniRef50_A1D352 Cluster: Chromodomain helicase (Chd1), putative;... 33 7.3
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_Q86VM9 Cluster: Conserved nuclear protein NHN1; n=36; T... 33 9.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 112 bits (270), Expect = 1e-23
Identities = 70/116 (60%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Frame = +3
Query: 480 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXS---SLVRSP 650
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL + +L+ P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 651 VPTLPLTGYLSAFLPSGKRGAFS*LTL*VSQFG--CRSFAPSWAVCTNPPFSPTAA 812
LP T P R A+ L CRSFAPSWAVCTNPPFSPTAA
Sbjct: 62 C-RLPDT-----CPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAA 111
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +1
Query: 622 PWXAPSCALLFRPCRLPDTCPPFSLRES 705
P APSCALLFRPCRLPDTCPPFSLRE+
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREA 76
Score = 41.1 bits (92), Expect = 0.036
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 671 RIPVRLSPFG--KAWRFLIAHAVGIXXXXXXXXXKLGCVHEPPVQPDRCALSGTIVLSXP 844
R+P PF +AWRFLIAHAVGI PP P TIVLS
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPT 122
Query: 845 GK 850
K
Sbjct: 123 RK 124
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 498 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 626
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +3
Query: 504 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 626
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 311 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 409
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -3
Query: 553 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 374
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 58.0 bits (134), Expect = 3e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = -2
Query: 779 HSPAWSERPTPELRYLQREL*ESATLSRREKGGQVSGKRQGRNRRAHEGAXQGETP 612
+SPAWSERP P ++ + +K QVSGKRQGRNRRAHEGA ++P
Sbjct: 31 YSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 287 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 445
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 53.2 bits (122), Expect = 8e-06
Identities = 35/84 (41%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 573 VRGGETRQDYK----DTRRFPLXSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTL*VS 740
VR GETRQD K PL S V +P+ + A + + S ++
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISA--- 79
Query: 741 QFGCRSFAPSWAVCTNPPFSPTAA 812
CRSFAPSWAV NPPFSPTAA
Sbjct: 80 --RCRSFAPSWAVSKNPPFSPTAA 101
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 46.4 bits (105), Expect = 0.001
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 639 VRSPVPTLPLTGYLSAFLPSG 701
+RSPVPTLPLTGYLSAFLPSG
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSG 21
Score = 33.9 bits (74), Expect = 5.5
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 703 SVALSHSSRCRYLSS 747
SVALSHSSRCRYLSS
Sbjct: 22 SVALSHSSRCRYLSS 36
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 779 VHEPPVQPDRCALSGTIVL-SXPGKXKLSPXAA 874
+HEPPVQPDRCALSG L S P + LSP AA
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAA 33
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.5 bits (93), Expect = 0.027
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 213 INKLTTTIAFILCFRFREEVWEVFSALMNRPTRGERRFAYW 335
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 357 ERGSGRAPNTQTASPRALADSLMQ 286
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.1 bits (87), Expect = 0.15
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 447 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 626
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 627 XS 632
S
Sbjct: 104 QS 105
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.45
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 98 MIRYIDEFGQTTTRMQ 145
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 36.3 bits (80), Expect = 1.0
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = -2
Query: 713 SATLSRREKGGQ--VSGKRQGRNRRAHEGAXQGETPGIFIVLSGFATSDLSVDFCDARQG 540
S+TL + GG+ + G +G + + G++P + GFA+ + +F +A G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621
Query: 539 GGAYGKTPATRPFYGSWP 486
G + +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 580 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 410
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 409 SELIPL 392
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_A0TR77 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 466
Score = 34.3 bits (75), Expect = 4.2
Identities = 41/130 (31%), Positives = 50/130 (38%), Gaps = 7/130 (5%)
Frame = +1
Query: 454 RKEHVSKRP--AKGQEP*KGRVAGVFXXXXXXXRASQKSTLKSEVAKPDRTIKIPGVSPW 627
R H S R A + P R AGV A ++ + RT +P S
Sbjct: 335 RGSHPSSRGLRAASRSPRARRPAGVRPLRHPGCAARNRAAAAGRTRRSVRTACLPAASSV 394
Query: 628 XAP----SCALLFRP-CRLPDTCPPFSLRESVALSHSSRCRYLSSGVGRSLQAGLCARTP 792
AP S A RP CRL + P + RE A S S R + GRS + R
Sbjct: 395 PAPCGPRSRAPPGRPECRLLPSIPSRASRERPAPSRSRPRRRCRACRGRSPWSRCGGRAT 454
Query: 793 RSARPLRLIR 822
SARP R R
Sbjct: 455 SSARPRRAAR 464
>UniRef50_A7LR53 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 556
Score = 33.9 bits (74), Expect = 5.5
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 566 RSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRIPVRLSPFGKAWRFLIAHAVGI 739
R S +WR Y+ P GK+ RA S+P A R V +PF W + + H V +
Sbjct: 214 RESGKWRY-----HYKTSPDGKVWRAAVQSEPIADRSTVYKNPFRNVWVYSMRHNVRV 266
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.5
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -2
Query: 620 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 441
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 440 DSVD 429
D +D
Sbjct: 304 DHID 307
>UniRef50_A1CZ73 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 224
Score = 33.9 bits (74), Expect = 5.5
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +1
Query: 550 ASQKSTLKSEVAKPDRTIKIPGVSPWXAPSCALLFRPCRLPDTCPPFSLRESVALSHSSR 729
A KS ++ V PD +++P W APSCA P P+ C + + A S S+
Sbjct: 131 ACDKSQAQA-VQVPD-LLEVPPTRTWGAPSCAATVGPSPTPNPC-KVKIDSTAAASISA- 186
Query: 730 CRYLSSGVGRSLQAGLCARTPRS 798
SS ++ GL TP S
Sbjct: 187 -ALASSACANPVRTGLSCPTPPS 208
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 247 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 83
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 414 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 593
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 594 QDYKDT 611
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8BJE3 Cluster: 12 days embryo eyeball cDNA, RIKEN
full-length enriched library, clone:D230045N10
product:SIMILAR TO SERINE THREONINE PROTEIN KINASE
homolog; n=2; Murinae|Rep: 12 days embryo eyeball cDNA,
RIKEN full-length enriched library, clone:D230045N10
product:SIMILAR TO SERINE THREONINE PROTEIN KINASE
homolog - Mus musculus (Mouse)
Length = 135
Score = 33.5 bits (73), Expect = 7.3
Identities = 24/67 (35%), Positives = 29/67 (43%)
Frame = +1
Query: 607 IPGVSPWXAPSCALLFRPCRLPDTCPPFSLRESVALSHSSRCRYLSSGVGRSLQAGLCAR 786
+PG PW P A +F CP S S A S S CR S S LC+R
Sbjct: 9 VPG-EPW--PLRAAVFSGSWGSSFCPVLSRIGSCAHSESPACRGRSGAARTSRLRRLCSR 65
Query: 787 TPRSARP 807
PR++ P
Sbjct: 66 RPRASLP 72
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 420 NTVIHRIRGITQERTCE 470
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A1D352 Cluster: Chromodomain helicase (Chd1), putative;
n=10; Pezizomycotina|Rep: Chromodomain helicase (Chd1),
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 1523
Score = 33.5 bits (73), Expect = 7.3
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 432 HRIRGITQERTCEQKASKRPGTVKRPRC--WRFSIGSAPLTSITKIDAQVRGGETRQDYK 605
HR+ + + K +K PG V R + S+ LT+ T + A+ ++++
Sbjct: 1261 HRVEKKNERANADDKTTKTPGAVHLVRRVEYLLSVLRDKLTNGTNVSARRAVENHHRNHR 1320
Query: 606 DTRRFPLXSSLVRSPVPTLPLTGYLSA 686
T R + +S+ SP P++ G+ A
Sbjct: 1321 STARTNVSASVSASPAPSIARKGHREA 1347
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 553 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 383
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
>UniRef50_Q86VM9 Cluster: Conserved nuclear protein NHN1; n=36;
Tetrapoda|Rep: Conserved nuclear protein NHN1 - Homo
sapiens (Human)
Length = 953
Score = 33.1 bits (72), Expect = 9.6
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = -1
Query: 822 PDKAQRSG*TGGSCTQPSLERTTYTRTEIPTA*AMRKRHAFPKGERRTGIR*AAGSEQES 643
PD+ R +GG P ER ++ P A A RKR P+ + + + G +
Sbjct: 853 PDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLSPQSKSSSKVTSVPGKASDP 912
Query: 642 ARGSXPGGNA 613
S G A
Sbjct: 913 GAASTKSGKA 922
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,641,270
Number of Sequences: 1657284
Number of extensions: 16932536
Number of successful extensions: 46234
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 44115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46202
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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