Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_L16
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.11 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.11 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.60 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.2  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 655 RPCRLPDTCPPFSLRESVALSHSSRC-RYLSSGVG 756
           R C      P   +R+S+ALS   +C RY+ +G G
Sbjct: 613 RRCCYHAVAPGTDIRQSIALSRKKKCIRYMEAGDG 647


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 655 RPCRLPDTCPPFSLRESVALSHSSRC-RYLSSGVG 756
           R C      P   +R+S+ALS   +C RY+ +G G
Sbjct: 505 RRCCYHAVAPGTDIRQSIALSRKKKCIRYMEAGDG 539


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 606 DTRRFPLXSSLVRSPVPTLPLTGYLSAF 689
           D+RR PL  ++ + P P  P+  Y  +F
Sbjct: 76  DSRRLPLRDAVEKRPPPDEPIDDYEPSF 103


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 149 KKCFICEICDAIALFVTIISCNKQVN 226
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 503 FYGSWPFAGLLLTCSFLRYPPDSVDNR 423
           FYGSW      L+   L Y P  V N+
Sbjct: 337 FYGSWINEESKLSLDLLSYVPREVYNK 363


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 172 NFTNKAFFSLH 140
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 172 NFTNKAFFSLH 140
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 804 SG*TGGSCTQPSLERTTYTRTEIPTA*AMRKRHAFP 697
           +G   G+  +   ERTT+TR ++    A+  +  +P
Sbjct: 59  AGYPAGNQRKQRRERTTFTRAQLDVLEALFGKTRYP 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,773
Number of Sequences: 336
Number of extensions: 3857
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)