Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_L14
(850 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 49 7e-07
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 46 7e-06
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 46 7e-06
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 46 7e-06
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 46 7e-06
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 46 7e-06
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 40 3e-04
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 37 0.004
SPBC800.12c |||ubiquitin family protein, unknown|Schizosaccharom... 36 0.005
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 34 0.022
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 30 0.48
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 29 1.1
SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier Hub1|Schi... 29 1.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.5
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 28 1.9
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 27 3.4
SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch... 27 4.4
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 26 5.9
SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr... 26 7.8
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 26 7.8
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 49.2 bits (112), Expect = 7e-07
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +2
Query: 173 EKQQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 352
+K V ++ ++ + LKE ++ E E+ LI+AG+++ D ++LK + I+DG ++HLV
Sbjct: 14 QKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLV 73
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Frame = +3
Query: 528 PTLDMLRQVLDNPLVQ----QMMNDPENMRSLITSNPQMQDL------MSRNPEISHMLN 677
P+ + L +L NP+VQ +M ++P+ + +I S+P +++ M ++PE +
Sbjct: 139 PSTEELANMLSNPMVQSSINEMFSNPQMLDMIINSSPHLRNAPPYVRQMMQSPEFRRAMT 198
Query: 678 NPELLRQTMEL 710
+P+ +RQ +L
Sbjct: 199 DPDTMRQMAQL 209
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 585 NDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRS 749
N P S+ NP+ + E+++ML+NP + E+ NP ML ++ S
Sbjct: 120 NIPMPSASMFGPNPE-NPVPPSTEELANMLSNPMVQSSINEMFSNPQMLDMIINS 173
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 185 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 358
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +2
Query: 182 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 355
+++I+ + + R+KE + K P Q LI+AGK M D + ++++ G +HLV+
Sbjct: 14 ELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVL 71
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 188 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKD 331
++ D I LKE + ++ + E E+ LI++G+I+ D T+ ++NIK+
Sbjct: 17 DVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKE 64
>SPBC800.12c |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 158 LKPRKEKQQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGL 337
++P ++ EI + I LKEVL+S+ ST+P + L++ GK + ++ L + D +
Sbjct: 65 VRPPIQQASTEINVQSTILELKEVLASQLSTQPSSIRLMYKGKPLVNSRLLDDYVDADSV 124
Query: 338 T 340
+
Sbjct: 125 S 125
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 34.3 bits (75), Expect = 0.022
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 188 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQ--HNIKDGLTVHLVI 355
++ + LKE+++ F ++L LI AG+++ + L++ H+ D +T HLVI
Sbjct: 19 QVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILHDATDLVTFHLVI 76
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 29.9 bits (64), Expect = 0.48
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 570 VQQMMNDPE---NMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTME 707
++ +++ PE N++ L+ N + + S NP++ L PE+L Q ++
Sbjct: 17 IEAILDKPEDEINLKELLEENGVLDECKSHNPKLLEYLCKPEVLSQLID 65
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 534 LDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQ 635
L LR ++D+P + ++N+PE +++LI P+ Q
Sbjct: 1166 LTTLRSIVDSPRKKIIVNNPEILQALIKLTPRNQ 1199
>SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier
Hub1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 73
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +2
Query: 173 EKQQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHL 349
+K +V+ D + K++++++ T+P ++ L + D TL + I DG+++ +
Sbjct: 12 KKVRVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADYEIHDGMSLEM 70
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -2
Query: 180 CFSXRGFNCDRN----FFRVVLSLCHFGNSRMTMYFGGKVKFIRERQIDE 43
CF R D N F ++ S+ H GN + G+ +F QID+
Sbjct: 330 CFGLRTLGFDNNEIHSLFLIIASILHIGNIEVASDRSGQARFPSLTQIDQ 379
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 567 LVQQMMNDPENMRSLITSNPQMQD-LMSRNPEISHMLNNP-ELLRQTMELA-RNPAMLQE 737
L+Q ++ + E +++L TSN D ++ P + + NN ++ +E A + + +
Sbjct: 1486 LIQSLLKENEELKNLTTSNLGSDDKMLDFAPLLEDVPNNTRNQIKGFVEKAISSKRAIAK 1545
Query: 738 LMRSHDRALSKSRKYTRXVYNALQRMYRDIQG 833
L + + L + K R + R+ +QG
Sbjct: 1546 LYSASEEKLFSTEKALREITKERDRLLHGLQG 1577
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 695 SNYGVGSQPRYVARVDA--LTRPRPLQISKVYQXGLQCAPKN 814
+ YG + A+V L+RP PL I KVY L+ A N
Sbjct: 247 NKYGDPGDVAFEAKVSVRTLSRPEPLTIKKVYSTLLKIADSN 288
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +2
Query: 119 QRDKTTLKKLRSQLKPRKEKQQVEIEED----ADIKRLKEVLSSKFSTEPEQLCLIFAGK 286
Q T+ + + +L +++ +ED A + L +LSS+ P +L + A
Sbjct: 249 QNKSTSTQPITFELNDDTLLEKISFKEDQKSLAPSEELDPILSSEDPNHPSKLDPLDASL 308
Query: 287 IMNDADTLKQHNIKDGLT 340
++ +K +N DGLT
Sbjct: 309 LLAFCHIIKNNNPDDGLT 326
>SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone
oxidase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 334 PIFDVVLLQGIGIIHDFPGENKT*LFWFCTEF*RQHFF 221
P FD+V + + + D + K L W EF R H F
Sbjct: 193 PAFDLVATEDVTTVTDLFQDWKNNLIWESAEFVRVHVF 230
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +3
Query: 543 LRQVLDNPLVQQMMNDPENMRSL 611
L++ D+ L+QQ+++DPE +++L
Sbjct: 662 LKEGQDDSLIQQIISDPETVKTL 684
>SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 323
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 104 ELPKWQRDKTTLKKLRSQLKPRKEKQQVEIEEDADIKRLKE 226
E PK + D TLK R +++ EK+ + +D++ +E
Sbjct: 111 EKPKTEADTRTLKIARYRMRQNLEKELKALSKDSETNEEQE 151
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +2
Query: 125 DKTTLKKLRSQLKPRKEKQQVEIEEDADIKRLKEVLSSKFSTEPEQLCLI 274
D T + S+ PR+ + ++ ++ L + ++SK+S++P+ L I
Sbjct: 93 DGTIKVNIGSESHPREIEFSIQKSSKINLHTLSQFVNSKYSSDPQVLSSI 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,409,814
Number of Sequences: 5004
Number of extensions: 68044
Number of successful extensions: 223
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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