Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_L13
(939 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 37 0.024
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 37 0.024
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 37 0.024
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.17
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 34 0.17
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 33 0.22
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.29
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.51
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.68
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 32 0.68
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 31 0.90
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 31 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.2
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 31 1.6
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.6
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.6
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.1
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.1
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.7
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 30 2.7
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.6
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 3.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 29 6.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 6.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 6.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 6.3
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 6.3
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.3
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 6.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.4
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 28 8.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 8.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.4
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 28 8.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.4
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.024
Identities = 41/170 (24%), Positives = 45/170 (26%), Gaps = 1/170 (0%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXPKGHQX 587
PGK G P P P P V +PPP K + PG P G
Sbjct: 113 PGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDP-GEAG 171
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
R S P P ++ G P P
Sbjct: 172 TPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGP 231
Query: 768 XXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPG 917
P N PP PP P P P P G PPG P PG
Sbjct: 232 PGPPGAPGNDGPPGPPGP--KGAPGPDGPPGVDGQSGPPGPPG-PAGTPG 278
Score = 34.3 bits (75), Expect = 0.13
Identities = 43/178 (24%), Positives = 49/178 (27%), Gaps = 4/178 (2%)
Frame = +3
Query: 408 PPGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPPKXEXRXXXKXGXXPGKXXXPKGHQX 587
PPG G P P P P + V+P E P P G
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAP---CEPTTPPPCKPCPQGPPGPPGPPG 162
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
A A P P +P G P G PG +
Sbjct: 163 APGDPGEA-----GTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP 217
Query: 768 XXXRXXPENXVPPXPP----XPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
P + PP PP PG P P P G PPG + P PGP P
Sbjct: 218 GAP-GEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGP-PGPPGP 273
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/105 (24%), Positives = 27/105 (25%), Gaps = 5/105 (4%)
Frame = +3
Query: 633 PXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXXXXXRXXPENXV---P 803
P PP P G GT PG P P
Sbjct: 155 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEP 214
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK--PGPXXPP 932
P PG+ P P G G P PK PGP PP
Sbjct: 215 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP 259
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 36.7 bits (81), Expect = 0.024
Identities = 41/170 (24%), Positives = 45/170 (26%), Gaps = 1/170 (0%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXPKGHQX 587
PGK G P P P P V +PPP K + PG P G
Sbjct: 108 PGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDP-GEAG 166
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
R S P P ++ G P P
Sbjct: 167 TPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGP 226
Query: 768 XXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPG 917
P N PP PP P P P P G PPG P PG
Sbjct: 227 PGPPGAPGNDGPPGPPGP--KGAPGPDGPPGADGQSGPPGPPG-PAGTPG 273
Score = 34.3 bits (75), Expect = 0.13
Identities = 43/178 (24%), Positives = 49/178 (27%), Gaps = 4/178 (2%)
Frame = +3
Query: 408 PPGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPPKXEXRXXXKXGXXPGKXXXPKGHQX 587
PPG G P P P P + V+P E P P G
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAP---CEPTTPPPCKPCPQGPPGPPGPPG 157
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
A A P P +P G P G PG +
Sbjct: 158 APGDPGEA-----GTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP 212
Query: 768 XXXRXXPENXVPPXPP----XPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
P + PP PP PG P P P G PPG + P PGP P
Sbjct: 213 GAP-GEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGP-PGPPGP 268
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/105 (24%), Positives = 27/105 (25%), Gaps = 5/105 (4%)
Frame = +3
Query: 633 PXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXXXXXRXXPENXV---P 803
P PP P G GT PG P P
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEP 209
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK--PGPXXPP 932
P PG+ P P G G P PK PGP PP
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP 254
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 36.7 bits (81), Expect = 0.024
Identities = 41/170 (24%), Positives = 45/170 (26%), Gaps = 1/170 (0%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXPKGHQX 587
PGK G P P P P V +PPP K + PG P G
Sbjct: 108 PGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDP-GEAG 166
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
R S P P ++ G P P
Sbjct: 167 TPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGP 226
Query: 768 XXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPG 917
P N PP PP P P P P G PPG P PG
Sbjct: 227 PGPPGAPGNDGPPGPPGP--KGAPGPDGPPGADGQSGPPGPPG-PAGTPG 273
Score = 34.3 bits (75), Expect = 0.13
Identities = 43/178 (24%), Positives = 49/178 (27%), Gaps = 4/178 (2%)
Frame = +3
Query: 408 PPGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPPKXEXRXXXKXGXXPGKXXXPKGHQX 587
PPG G P P P P + V+P E P P G
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAP---CEPTTPPPCKPCPQGPPGPPGPPG 157
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
A A P P +P G P G PG +
Sbjct: 158 APGDPGEA-----GTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP 212
Query: 768 XXXRXXPENXVPPXPP----XPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
P + PP PP PG P P P G PPG + P PGP P
Sbjct: 213 GAP-GEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGP-PGPPGP 268
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/105 (24%), Positives = 27/105 (25%), Gaps = 5/105 (4%)
Frame = +3
Query: 633 PXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXXXXXRXXPENXV---P 803
P PP P G GT PG P P
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEP 209
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK--PGPXXPP 932
P PG+ P P G G P PK PGP PP
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP 254
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
P P PP P GP +PT G PPG P PGP P
Sbjct: 222 PAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPG-PAGAPGPDGNP 269
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARP--XPKPGPXXPPHP 938
PP P P GP P G P G P PGP PP P
Sbjct: 150 PPCQPCPAGPPGP--PGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGP 195
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNP-TXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PP PP P + GP+P P G + PP A P P P P
Sbjct: 717 PPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAP 763
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 496 RYXPPQRXKXGXPQXQGXXQEKXXXQKATKXPXXV--KXPRGXRXPXGPXPRNXPPXNRP 669
R PP+ G P + A+ P G + P P P+ PP +P
Sbjct: 179 RSVPPKEGPNGNPATPSSSSQPIPSPSASSIAEESLDDKPSGTKMPAQPPPQQHPPPPQP 238
Query: 670 PXXXGAXPPQ 699
PPQ
Sbjct: 239 QQIMSPMPPQ 248
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.22
Identities = 44/179 (24%), Positives = 48/179 (26%), Gaps = 3/179 (1%)
Frame = +3
Query: 408 PPGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPPKXEXRXXXKXGXXPGKXXXPKGHQX 587
PPG G P P P PP PPPK + P PKG
Sbjct: 115 PPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPG 174
Query: 588 AXXRKXAAWX-AXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXX 764
+ P PP + P G P G PG+
Sbjct: 175 PQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGE---PGK-------------- 217
Query: 765 XXXXRXXPENXVPPXPPXP-GKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP-PH 935
P PP PP P G P P G PPG P K P PH
Sbjct: 218 --VINGAPPG--PPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPH 272
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
P PP P GP +PT G PPG P PGP P
Sbjct: 226 PAGPPGPAGPPGPDGASPTAAPGAAGPPGPPG-PAGAPGPDGNP 268
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXN-PTXXXGYLHPPGXXARPXP-KPGPXXPPHP 938
P PP PP P GP + G P G P P PGP PP P
Sbjct: 180 PAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGP 232
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARP---XPKPGPXXPP 932
PP PP P P P +P + PP RP P P P PP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Score = 24.2 bits (50), Expect(2) = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 607 PRGXRXPXGPXPRNXPPXNRPP 672
P R P P PR+ PP RPP
Sbjct: 141 PPPPRVPRTPPPRS-PPPRRPP 161
Score = 22.2 bits (45), Expect(2) = 8.7
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +1
Query: 787 RKTXSPPXPPFRXXRXAPFPQ------TPPXXXXTSTPRXXGPVRXQNRGR 921
R +PP P R R P P+ TPP PR R R R
Sbjct: 159 RPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSHDRRALRAR 209
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P+ VPP PP P + P P P P +P P+P P PHP
Sbjct: 92 PQGYVPPPPPPPTQ---PEP-EPEPRPEPQPEPQPEPQPEPQPEPQPEPHP 138
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.68
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXP----KPGPXXPP 932
P P P + P P +P+ PPG P P PGP PP
Sbjct: 217 PSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPP 264
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +3
Query: 789 ENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXP-KPGPX--XPPHP 938
E+ P PP PG +P+ G PPG R P PGP PP P
Sbjct: 219 EDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGP 271
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.68
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 819 PGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PG P P P G + PG R P PGP PP P
Sbjct: 185 PGAAGRPGPPGPRGEPGTEYRPGQAGRAGP-PGPRGPPGP 223
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 819 PGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PG P P P G + PG R P PGP PP P
Sbjct: 185 PGAAGCPGPPGPRGEPGTEYRPGQAGRAGP-PGPRGPPGP 223
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
PP P PG G FP N PPG RP P PP
Sbjct: 553 PPTTPNPGHPQGFFPTNQAG------PPGTPGRPIPPYAMGQPP 590
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PP PP P GP G P G P P PGP PP P
Sbjct: 182 PPGPPGPDGNAGP-----AGAPGVPGPDGDAGSPPP-PGPPGPPGP 221
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 777 RXXPENXVPPXP---PXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
R P + V P P P PFP +PT G + P R P P PP
Sbjct: 269 RLVPSHQVNPAPMPQAPPVSTPVPFPPSPTIGNGAVPKPAQEPRIPPSPTSALPP 323
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.6
Identities = 37/162 (22%), Positives = 40/162 (24%), Gaps = 3/162 (1%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXP--KGH 581
PGK G P P P P +PPP K + PG P G
Sbjct: 115 PGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGT 174
Query: 582 QXAXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXX 761
P P + P G P PG
Sbjct: 175 PGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPP 234
Query: 762 XXXXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPG 887
P N PP PP P P P P G PPG
Sbjct: 235 GPPGA---PGNDGPPGPPGP--KGSPGPDGPAGVDGQAGPPG 271
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.6
Identities = 37/162 (22%), Positives = 40/162 (24%), Gaps = 3/162 (1%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXP--KGH 581
PGK G P P P P +PPP K + PG P G
Sbjct: 115 PGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGT 174
Query: 582 QXAXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXX 761
P P + P G P PG
Sbjct: 175 PGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPP 234
Query: 762 XXXXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPG 887
P N PP PP P P P P G PPG
Sbjct: 235 GPPGA---PGNDGPPGPPGP--KGSPGPDGPAGVDGQAGPPG 271
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 39/170 (22%), Positives = 49/170 (28%), Gaps = 1/170 (0%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXPKGHQX 587
PGK G P P P P + ++PPP K + PG P+G
Sbjct: 116 PGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPG----PQGDAG 171
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
A + A + P P K P G G PG
Sbjct: 172 APGQAGQGSGAGAPGPAGP-----KGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAG 226
Query: 768 XXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPG 917
P P P PG+ P P P+ G G P +PG
Sbjct: 227 PQGPPGPAGS-PGAPGGPGQAGAPGPKGPSGAPGQPGADGNPGAPG-QPG 274
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 39/170 (22%), Positives = 49/170 (28%), Gaps = 1/170 (0%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXPKGHQX 587
PGK G P P P P + ++PPP K + PG P+G
Sbjct: 116 PGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPG----PQGDAG 171
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
A + A + P P K P G G PG
Sbjct: 172 APGQAGQGSGAGAPGPAGP-----KGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAG 226
Query: 768 XXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPG 917
P P P PG+ P P P+ G G P +PG
Sbjct: 227 PQGPPGPAGS-PGAPGGPGQAGAPGPKGPSGAPGQPGADGNPGAPG-QPG 274
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 39/170 (22%), Positives = 49/170 (28%), Gaps = 1/170 (0%)
Frame = +3
Query: 411 PGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPP-KXEXRXXXKXGXXPGKXXXPKGHQX 587
PGK G P P P P + ++PPP K + PG P+G
Sbjct: 116 PGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPG----PQGDAG 171
Query: 588 AXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXX 767
A + A + P P K P G G PG
Sbjct: 172 APGQAGQGSGAGAPGPAGP-----KGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAG 226
Query: 768 XXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPG 917
P P P PG+ P P P+ G G P +PG
Sbjct: 227 PQGPPGPAGS-PGAPGGPGQAGAPGPKGPSGAPGQPGADGNPGAPG-QPG 274
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.3 bits (65), Expect = 2.1
Identities = 43/185 (23%), Positives = 50/185 (27%), Gaps = 11/185 (5%)
Frame = +3
Query: 408 PPGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPPKXEXRXXXKXG-XXPGKXXXPKGHQ 584
PPG G P PP P ++ PPK G P P G
Sbjct: 105 PPGPPGEPGQPGSAGPPGPPGEDNTATFAPITCPPKDPSCVKCPEGPAGPPGPEGPAGPA 164
Query: 585 XAXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXX 764
+ + A A P P S P G P G PG+
Sbjct: 165 GSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEAG--PNGEPGAPGKD------------- 209
Query: 765 XXXXRXXPENXVPPXPPXPGKXXG----------PFPXNPTXXXGYLHPPGXXARPXPKP 914
+ P PP PP PG G P P P G G +P
Sbjct: 210 GEKGKGEPGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPGSPG 269
Query: 915 GPXXP 929
GP P
Sbjct: 270 GPGLP 274
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P PP PP P P P + PP P P P P P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P PP PP P P G+ PPG + P+ P PP P
Sbjct: 95 PPRGYPPPPPQGADTWRGAP--PPAHHGHFGPPGHHFQGPPQHFPPGPPRP 143
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 804 PXPPXPGKXXGPFPXNPTXXXGY-LHPPGXXARPXPKPGPXXPPHP 938
P PP P GP N GY + PPG P +PG P P
Sbjct: 255 PGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPG-PSGRPGAPGQPGP 299
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +3
Query: 789 ENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXP--KPGPXXP 929
E VPP P P GP PT G PG RP PGP P
Sbjct: 131 EQDVPPCNPCPPGPPGP--QGPTGNSGQPGRPGNPGRPGSPGTPGPVGP 177
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 786 PENXVPPXPPXP-GKXXGPFPXNPTXXXGYLHPPGXXARPXP--KPGPXXPPHP 938
P PP PP P G P P P PPG P P PG P P
Sbjct: 204 PARSGPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGP 257
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPH 935
PP PG F P PP +P PG PPH
Sbjct: 6 PPNGQMPGYPQQQFNQQPQFQSNGFPPPAAPQKPAQVPGGFPPPH 50
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/102 (22%), Positives = 29/102 (28%), Gaps = 3/102 (2%)
Frame = +3
Query: 633 PXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXXXXXXXRXXPENXVPPXP 812
P P + P G P G PG+ P + P P
Sbjct: 157 PGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKP 216
Query: 813 PXPGKXXGPFPXNPTXXXGYLHP---PGXXARPXPKPGPXXP 929
PG+ P P G PG +P P+ GP P
Sbjct: 217 GQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRGGPGEP 258
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 12/58 (20%)
Frame = +3
Query: 801 PPXPPX----PGKXXGPFPXNPTXXXGYLHPPGXXARPXP--------KPGPXXPPHP 938
PP PP PGK P P G PG +P P KPG PP P
Sbjct: 150 PPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGP 207
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK--PGPXXPPHP 938
PP PP PG P P + PP P P PG PP P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 819 PGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PG P P P G + PG RP P PGP P
Sbjct: 192 PGNPGRPGPAGPRGEPGTEYKPGQPGRPGP-PGPRGEAGP 230
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK--PGPXXPPHP 938
PP PP PG P P + PP P P PG PP P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P PP G P P + G L PP P P G PP P
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P PP G P P + G L PP P P G PP P
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P PP G P P + G L PP P P G PP P
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPP 338
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
PP PP P P P P P P P P P P
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSP 1385
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P + P PP P K P P P + P P P P PP P
Sbjct: 318 PTTFILPPPPPPMKLD-PSPQPAATPVEITEIPPIISPPAPPPPPPPPPPP 367
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHP-PGXXARPXPKPGPXXPPHP 938
P PP P P P P Y P P RP P P P P+P
Sbjct: 92 PGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQP-PQPQPQPYP 136
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHP-PGXXARPXPKPGPXXPPHP 938
P PP P P P P Y P P RP P P P P+P
Sbjct: 92 PGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQP-PQPQPQPYP 136
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 804 PXPPXPGKXXGPFPXNPTXXXGYLHP-PGXXARPXPKPGPXXPPHP 938
P PP P P P P Y P P RP P P P P+P
Sbjct: 92 PGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQP-PQPQPQPYP 136
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK-----PGPXXPPHP 938
PP P PG GP P G PPG P PGP PP P
Sbjct: 145 PPCQPCPGGPPGP--AGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +3
Query: 801 PPXPPXP----GKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
PP PP P G GP P G P G P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +3
Query: 801 PPXPPXPGKXXGPF----PXNPTXXXGYLHPPGXXARPXP--KPGPXXPP 932
P PP P GP P P G G P P KPGP PP
Sbjct: 145 PAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPP 194
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 810 PPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PP P P + PP P P PG PP P
Sbjct: 121 PPGQQNAFNRSPMMPNGTPNMMSPPSMGRVPGPSPGGPQPPGP 163
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 810 PPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PP P P + PP P P PG PP P
Sbjct: 121 PPGQQNAFNRSPMMPNGTPNMMSPPSMGRVPGPSPGGPQPPGP 163
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK-----PGPXXPPHP 938
PP P PG GP P G PPG P PGP PP P
Sbjct: 145 PPCQPCPGGPPGP--AGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +3
Query: 801 PPXPPXP----GKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
PP PP P G GP P G P G P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK-----PGPXXPPHP 938
PP P PG GP P G PPG P PGP PP P
Sbjct: 145 PPCQPCPGGPPGP--AGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +3
Query: 801 PPXPPXP----GKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
PP PP P G GP P G P G P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK-----PGPXXPPHP 938
PP P PG GP P G PPG P PGP PP P
Sbjct: 145 PPCQPCPGGPPGP--AGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +3
Query: 801 PPXPPXP----GKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
PP PP P G GP P G P G P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/102 (26%), Positives = 30/102 (29%), Gaps = 5/102 (4%)
Frame = +3
Query: 639 PPEXXXXKSTPXXXGGXP--PXGTXKXPGRSXXXXXXXXXXXXXXXXXRXXPENXVPPXP 812
PP+ TP P P G PG P N P P
Sbjct: 124 PPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGP 183
Query: 813 PXPGKXXGPF-PXNPTXXXGYLHP--PGXXARPXPKPGPXXP 929
P PG GP P G P PG +P +PG P
Sbjct: 184 PGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPG-QPGQRGP 224
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 7/51 (13%)
Frame = +3
Query: 801 PPXPPXPGKXXGPF-------PXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
P PP P GP P P G P G P KPGP PP
Sbjct: 147 PAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPG-PGGKPGPAGPP 196
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 810 PPXPGKXXGPFPXNPTXXXGYLHPPGXXAR--PXPKPGPXXPPHP 938
PP P K G P PT L G +R P P G PP P
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPP 202
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 810 PPXPGKXXGPFPXNPTXXXGYLHPPGXXAR--PXPKPGPXXPPHP 938
PP P K G P PT L G +R P P G PP P
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 77
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 810 PPXPGKXXGPFPXNPTXXXGYLHPPGXXAR--PXPKPGPXXPPHP 938
PP P K G P PT L G +R P P G PP P
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 140
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 810 PPXPGKXXGPFPXNPTXXXGYLHPPGXXAR--PXPKPGPXXPPHP 938
PP P K G P PT L G +R P P G PP P
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 171
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 810 PPXPGKXXGPFPXNPTXXXGYLHPPGXXAR--PXPKPGPXXPPHP 938
PP P K G P PT L G +R P P G PP P
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 295
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXP 929
P P P PG+ P P G PG +P +PGP P
Sbjct: 202 PGQDAPSEPLVPGEPGAPGEAGPQGPPGQPGTPGQNGQPG-QPGPKGP 248
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P P PP P + P P PP P P PP P
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 509
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.4
Identities = 34/170 (20%), Positives = 38/170 (22%), Gaps = 2/170 (1%)
Frame = +3
Query: 408 PPGKGGXXXGPXXXXPPTXPLPPXVRXRXXVSPPPKXEXRXXXKXGXXPGKXXXP--KGH 581
PPGK G P P P P PP PG P GH
Sbjct: 110 PPGKNGAPGRPGAPGAPGFPGRPPAVCEEITEPPCTPCPPGEPGPPGPPGDAGNPGQSGH 169
Query: 582 QXAXXRKXAAWXAXSXRPXPPEXXXXKSTPXXXGGXPPXGTXKXPGRSXXXXXXXXXXXX 761
P + P G P T PG
Sbjct: 170 PGRNGNDGGVGPQGPPGPPGNNGEGGRDGPRGEQGRPAISTPALPGDPGAPGEPGPSGLP 229
Query: 762 XXXXXRXXPENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPK 911
P + P P P P P G P G +P P+
Sbjct: 230 GDQGQAGRPGSDGAPGPQGP-----PGPPGQQGHPGQAGPAGQPGQPGPQ 274
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
P P P PG P P G PG P P+ GP PP
Sbjct: 206 PAISTPALPGDPGAPGEPGPSGLPGDQGQAGRPGSDGAPGPQ-GPPGPP 253
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 801 PPXPPXPGKXXGP-FPXNPTXXXGY----LHPPGXXARPXPKPGPXXPPHP 938
P P PGK P P NP + PP P PGP PP P
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGP 161
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 801 PPXPPXPGKXXGP-FPXNPTXXXGY----LHPPGXXARPXPKPGPXXPPHP 938
P P PGK P P NP + PP P PGP PP P
Sbjct: 78 PGKPGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGP 128
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 801 PPXPPXPGKXXGP-FPXNPTXXXGY----LHPPGXXARPXPKPGPXXPPHP 938
P P PGK P P NP + PP P PGP PP P
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGP 161
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 6/51 (11%)
Frame = +3
Query: 786 PENXVPPXP------PXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGP 920
P +PP P P P G P P G PP P P P P
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
PP P G G + T G + PPG A P P P PP
Sbjct: 157 PPGPAGDGGRDGADGVDGTP--GEIGPPGPPAPPGPDPHSLFPP 198
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P+ PP P P P P P+ G P G P GP PHP
Sbjct: 55 PDPSSPPPAPRPSGQP-PGPQGPSDLPG---PSGAPPGPPHPSGPPHRPHP 101
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +3
Query: 801 PPXPPXPG---KXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PP PP PG G P P G PP K GP PP P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +3
Query: 801 PPXPPXPG---KXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PP PP PG G P P G PP K GP PP P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 786 PENXVPPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
P P PP P + P P PP P P PP P
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 516
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +3
Query: 801 PPXPPXPGKXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPP 932
PP P G G + T G + PPG A P P P PP
Sbjct: 138 PPGPAGDGGRDGADGVDGTP--GEIGPPGPPAPPGPDPHSLFPP 179
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +3
Query: 801 PPXPPXPG---KXXGPFPXNPTXXXGYLHPPGXXARPXPKPGPXXPPHP 938
PP PP PG G P P G PP K GP PP P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.140 0.474
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,677,416
Number of Sequences: 27780
Number of extensions: 191364
Number of successful extensions: 1090
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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