Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_L07
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.3  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +2

Query: 434 IMIEGKKEIKREDGW--TRSHFERRFLLPEGFPPERVECHLDKGKLKLIAFRAE 589
           + +E   EI +  GW  T +    RF + +GF P+R+   +D   L+   F  E
Sbjct: 317 LFLEELSEIFKPRGWVLTIAVPASRFRVEDGFNPQRLGSLVDFINLQAFDFHRE 370


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 607 RPLLQRFSSKGDKLQLPFIQVTLY 536
           +PL + F+   DKL  P  Q  +Y
Sbjct: 29  QPLPRHFNPPSDKLHHPIHQTVIY 52


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 672 YNLKLIFHFVCSLFTDFS*IGTALSCSG 589
           YNL+ I++F C   T F+     L CSG
Sbjct: 51  YNLRRIYYFYCVSIT-FNVHLLFLLCSG 77


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 159 TVLATTLEESDVQGIQLLEHLKILSPSSPGTLSSAIRLSTSGKP 290
           TVL +T    ++  +Q+ E ++ L PS+   + S + L     P
Sbjct: 116 TVLTSTGLRRNLSSLQIGEKIQALDPSTNELVFSEVLLFLDYNP 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,453
Number of Sequences: 336
Number of extensions: 3168
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)