Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_L04
         (1045 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          82   3e-17
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          82   3e-17
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          82   3e-17
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           77   7e-16

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 81.8 bits (193), Expect = 3e-17
 Identities = 44/93 (47%), Positives = 52/93 (55%)
 Frame = +3

Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
           ++K   + LKYPI+HGIVTNWDDM  IWHHTFYN LRV P+  P   +   P  P     
Sbjct: 60  QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118

Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
                  +TFNTP  +       LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150



 Score = 64.9 bits (151), Expect = 4e-12
 Identities = 30/39 (76%), Positives = 30/39 (76%)
 Frame = +1

Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
           MCKAGFA  DAP AVFPSIV RP HQG MVGMG  DS V
Sbjct: 17  MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 81.8 bits (193), Expect = 3e-17
 Identities = 44/93 (47%), Positives = 52/93 (55%)
 Frame = +3

Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
           ++K   + LKYPI+HGIVTNWDDM  IWHHTFYN LRV P+  P   +   P  P     
Sbjct: 60  QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118

Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
                  +TFNTP  +       LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150



 Score = 64.9 bits (151), Expect = 4e-12
 Identities = 30/39 (76%), Positives = 30/39 (76%)
 Frame = +1

Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
           MCKAGFA  DAP AVFPSIV RP HQG MVGMG  DS V
Sbjct: 17  MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 81.8 bits (193), Expect = 3e-17
 Identities = 44/93 (47%), Positives = 52/93 (55%)
 Frame = +3

Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
           ++K   + LKYPI+HGIVTNWDDM  IWHHTFYN LRV P+  P   +   P  P     
Sbjct: 60  QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118

Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
                  +TFNTP  +       LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150



 Score = 64.9 bits (151), Expect = 4e-12
 Identities = 30/39 (76%), Positives = 30/39 (76%)
 Frame = +1

Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
           MCKAGFA  DAP AVFPSIV RP HQG MVGMG  DS V
Sbjct: 17  MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 77.4 bits (182), Expect = 7e-16
 Identities = 42/93 (45%), Positives = 50/93 (53%)
 Frame = +3

Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
           ++K   + LKYPI+HGI+TNWDDM  IWHHTFYN LRV P+  P   +   P  P     
Sbjct: 60  QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKSNRE 118

Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
                  +TF  P  V       LSLY SG TT
Sbjct: 119 KMTQIMFETFAAPA-VYVAIQAVLSLYASGRTT 150



 Score = 64.1 bits (149), Expect = 7e-12
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
           MCKAGFA  DAP AVFPSIV RP HQG MVGMG+ D+ V
Sbjct: 17  MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYV 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,755
Number of Sequences: 2352
Number of extensions: 12652
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 115929918
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)