Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_L04
(1045 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 83 4e-16
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 82 7e-16
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 82 7e-16
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 82 7e-16
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 82 7e-16
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 82 7e-16
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 82 7e-16
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 82 7e-16
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 82 7e-16
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 82 7e-16
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 82 7e-16
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 65 9e-11
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 65 9e-11
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 65 9e-11
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 65 9e-11
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 51 1e-06
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 41 0.001
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 1.0
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 82.6 bits (195), Expect = 4e-16
Identities = 43/93 (46%), Positives = 53/93 (56%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LR+ P+ P + P P
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLT-EAPLNPKSNRE 117
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + + LSLY SG TT
Sbjct: 118 KMTQIMFETFNTPA-MYVNIQAVLSLYASGRTT 149
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 16 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 74
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 75 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 106
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 46 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 104
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 105 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 136
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +1
Query: 202 KAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
+AGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 41
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 81.8 bits (193), Expect = 7e-16
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ*TPRXCSLRXPSTPMPTYI 506
++K + LKYPI+HGIVTNWDDM IWHHTFYN LRV P+ P + P P
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANRE 118
Query: 507 T*PXSXSQTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFNTP + LSLY SG TT
Sbjct: 119 KMTQIMFETFNTPA-MYVAIQAVLSLYASGRTT 150
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNI 407
++K + LKYPI+HGIVTNWDDM I
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNI 407
++K + LKYPI+HGIVTNWDDM I
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDM 398
++K + LKYPI+HGIVTNWDDM
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 64.9 bits (151), Expect = 9e-11
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = +1
Query: 196 MCKAGFARHDAPHAVFPSIVXRPPHQGXMVGMGHXDSXV 312
MCKAGFA DAP AVFPSIV RP HQG MVGMG DS V
Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 327 KAKXVSMXLKYPIQHGIVTNWDDMXNI 407
++K + LKYPI+HGIVTNWDDM I
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 51.2 bits (117), Expect = 1e-06
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 351 LKYPIQHGIVTNWDDMXNIWHHTF-YNXLRVTPQ*TPRXCSLRXPSTPMPTYIT*PXSXS 527
++YP++HGIV NW DM IW + F + L++ P+ P + P P+
Sbjct: 70 IEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLT-DAPLNPLKNRERSAEIFF 128
Query: 528 QTFNTPGHVXXHPXPXLSLYXSGXTT 605
+TFN P + LSLY +G TT
Sbjct: 129 ETFNVPA-LYIQMQAVLSLYATGRTT 153
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 174 VIDNGSXYVQGRFRKT*CSSRRIPLXRXKAPPSRXDGRYGTQXLVXIVTRHKAKXVSMXL 353
V+DNG+ +V+ + T + P + P R R G + ++ + + L
Sbjct: 10 VVDNGTGFVKCGYAGTNFPAHIFPSMVGR-PIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 354 --KYPIQHGIVTNWDDMXNIWHHTF 422
YP+ +GIV NWDDM ++W HTF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTF 93
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 446 PMNTPXLLTEAPLNPNANIHNMTXIXF 526
P LLTE PLNPN+N M + F
Sbjct: 102 PKECKLLLTEPPLNPNSNREKMFQVMF 128
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 351 LKYPIQHGIVTNWDDMXNIWHHTFYNXLRVTPQ 449
+KYPI+HGIV +WD M W + LR P+
Sbjct: 81 VKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPE 113
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 360 PIQHGIVTNWDDMXNIWHHTF 422
PI+ G V NWD IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 360 PIQHGIVTNWDDMXNIWHHTF 422
PI+ G V NWD IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787,620
Number of Sequences: 27780
Number of extensions: 295310
Number of successful extensions: 488
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2772493070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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