Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_K23
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0005 + 4873802-4874036,4874156-4874227,4874728-4874815,487...    82   7e-16
01_07_0102 - 41093042-41093231,41093385-41093473,41093730-410939...    29   5.0  

>03_02_0005 +
           4873802-4874036,4874156-4874227,4874728-4874815,
           4875192-4875339,4875429-4875467,4875642-4875722,
           4875781-4875846
          Length = 242

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 6/94 (6%)
 Frame = +1

Query: 355 SDAMIGDTNIFITDKE-LAIGEIEIMIAEPSA-----RGKKRGWEAVKLMLLYGIKYIKI 516
           ++AM+GD NI++ D + L + EIEIMIAE  +     RGK  G EA+ +M+ + ++   I
Sbjct: 101 TEAMVGDVNIYMNDPDDLQLAEIEIMIAEHKSTFCYSRGKGLGQEAILIMMAFAVEKYGI 160

Query: 517 QTFEAKISLQNVISIKMFKKLGFQEKSVSAVFQE 618
            TF AKI+  N  S+K+F+KLGF++ S S+VF+E
Sbjct: 161 HTFRAKINESNTASLKLFRKLGFKDASYSSVFKE 194


>01_07_0102 -
           41093042-41093231,41093385-41093473,41093730-41093924,
           41095173-41095334,41095412-41095484,41095691-41095758,
           41095847-41095894,41096012-41096101,41096204-41096286,
           41097000-41097066
          Length = 354

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 412 GEIEIMIAEPSARGKKRGWEAVKLMLLYGIKYIKIQTFEAKISLQNVISIKMFKK 576
           G++ IM+   S  G    + A+ L++ YG+  +K+ TF  +  + N      FKK
Sbjct: 173 GDVPIMVTGHSMGGAMASFCALDLVVNYGLDGVKLMTF-GQPRIGNAAFASFFKK 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,536,132
Number of Sequences: 37544
Number of extensions: 246085
Number of successful extensions: 457
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)